User: gaughey

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gaughey10
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4 months, 2 weeks ago
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9 months, 2 weeks ago
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Posts by gaughey

<prev • 5 results • page 1 of 1 • next >
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Answer: A: Sra Format Usage - How To
... I know this is an old question, but I've just spent the afternoon wrestling with SRA-Toolkit as suggested by other answers - my computer seems not to like it -or I'm too stupid to make it work. So I thought I should point out that there is a way to solve this problem using galaxy for computer illit ...
written 4 months ago by gaughey10
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Comment: C: gene ontology visualisation
... Perhaps "classes" would have been more apt. https://en.wikipedia.org/wiki/Ontology_components ...
written 9 months ago by gaughey10
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Comment: C: gene ontology visualisation
... Great, thanks! I'll have a go with Rgraphviz and see what I can come up with. ...
written 9 months ago by gaughey10
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Comment: C: gene ontology visualisation
... Thanks for your comments all. Apologies if I caused any confusion. Clearly, I don't know a lot about gene ontology (which is why I am here asking questions...). To clarify: In my experience GO analysis tools normally yield three seperate ontological descriptors, (BP - biological process, CC - cellul ...
written 9 months ago by gaughey10
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gene ontology visualisation
... Hi Does anyone know how to make a GO enrichment diagram like the one in fig 1D of this paper? http://www.sciencedirect.com/science/article/pii/S2211124715006075 Unfortunatley they don't say how the figure was constructed. I've seen a few tools for this, like revigo (http://revigo.irb.hr/) which is ...
gene chip-seq rna-seq written 9 months ago by gaughey10 • updated 9 months ago by EagleEye4.8k

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