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Posts by hivemind
Answer: A: Parse hmm(er) profiles in R
... Hi, thanks for the replies. I think I have to clarify my request: I am not trying to parse/load the results of hmmsearch (this should be no problem using SearchIO in Python). I want to load the hmmbuild model. Basically the values for the match-states, insertion-states and the transition-probabilit ...
... Hello everyone, I am currently working with HMMER3 and created a bunch of profiles which I now want to use for another project. The problem is, that I want to write the code for my project in R and can't find a method to load the profiles. Does anybody know a method or package to get the model out ...
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