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32
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replies
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How To Extract Reads-Pairs Aligned Concordantly Exactly 1 Time?
bowtie2 mapping
updated 2.1 years ago by ★ 1.3k • written 10.6 years ago by ▴ 660
4
votes
6
replies
1.1k
views
Are there institutions/companies which provide paid access to computational resources?
RAM Whole genome assemblies Whole Exome Sequening
5.4 years ago by Rahul Sharma ▴ 660
0
votes
0
replies
932
views
Tools to access variation of ploidy at certain genomic loci using WES
WES Ploidy Endomitosis
5.5 years ago by Rahul Sharma ▴ 660
1
vote
2
replies
2.0k
views
Ribo-seq couts are more than RNA-seq count
rna-seq Ribo-SEq Xtail NGS data analysis
updated 6.1 years ago by ▴ 20 • written 6.5 years ago by ▴ 660
0
votes
0
replies
1.3k
views
DeSEq2 unexpressed genes and unchnaged gene expression
RNA-Seq DeSeq2 Gene expression
6.9 years ago by Rahul Sharma ▴ 660
1
vote
2
replies
2.1k
views
MSA processing algorithms in perl
perl MSA algorithms
7.9 years ago by Rahul Sharma ▴ 660
0
votes
0
replies
2.7k
views
Bambus2 .Mate File
scaffolding
updated 8.7 years ago by 20 • written 12.6 years ago by ▴ 660
1
vote
3
replies
3.7k
views
How Does Trinity Deal With Polya Tails On Sequencing Reads? Is It Better To Trim Them Of Before Assembly?
trinity
updated 8.7 years ago by 20 • written 10.8 years ago by ▴ 660
0
votes
1
reply
3.0k
views
MIRA for metagenome assembly
Metagenome next-gen MIRA
updated 2.1 years ago by 44k • written 9.1 years ago by ▴ 660
9
votes
5
replies
14k
views
How To Extract Cds And Protein Sequences From Cufflinks Transcripts.Gtf File?
cufflinks rna-seq cds
updated 9.4 years ago by ▴ 60 • written 10.8 years ago by ▴ 660
0
votes
3
replies
3.8k
views
Difference In Cufflinks Transcripts With Merging 3 Cufflink Outputs And By Pooling All 3 Libraries?
cufflinks rna-seq tophat2
updated 10.4 years ago by 20 • written 10.9 years ago by ▴ 660
12
votes
7
replies
4.9k
views
Smaller Assembled Genome Size Than Expected
illumina velvet assembly next-gen sequencing repeats
updated 10.7 years ago by ★ 2.6k • written 12.7 years ago by ▴ 660
1
vote
2
replies
2.8k
views
Tophat2 Error With Repeat-Masked Genome!!
tophat2 bowtie2
10.9 years ago by Rahul Sharma ▴ 660
3
votes
2
replies
2.8k
views
Parallelizing Read Trimming/Filtering And Genome Assembly!!
parallel trimming assembly
updated 10.9 years ago by 164k • written 10.9 years ago by ▴ 660
3
votes
2
replies
3.4k
views
Does Velvet Assembler Use Ram Of All Nodes Altogether?
genome velvet assembly
updated 11.0 years ago by ★ 2.2k • written 11.0 years ago by ▴ 660
2
votes
2
replies
6.6k
views
What Happens When The K-Mer Size Is Larger Than The Trimmed Reads Size In Velvet Assembly?
velvet
updated 11.0 years ago by 8.6k • written 11.5 years ago by ▴ 660
1
vote
1
reply
2.9k
views
Genome Assembly From Large Insert Libraries
velvet scaffolding illumina
updated 11.1 years ago by ★ 1.7k • written 11.1 years ago by ▴ 660
2
votes
4
replies
3.8k
views
Protein Functional Annotations
go kegg annotation
11.7 years ago by Rahul Sharma ▴ 660
1
vote
4
replies
3.4k
views
Illumina Hiseq 2000 Reads Assembly (Genomic Dna)
illumina hiseq genome assembly
updated 11.7 years ago by 5.3k • written 11.7 years ago by ▴ 660
5
votes
7
replies
2.2k
views
Defining New Gene Clusters
gene
updated 11.9 years ago by 35k • written 11.9 years ago by ▴ 660
0
votes
2
replies
2.7k
views
Codeml Fix_Omega And Omega
codeml selection
11.9 years ago by Rahul Sharma ▴ 660
5
votes
4
replies
4.8k
views
Merge Velvet Assemblies
velvet merge
updated 12.7 years ago by 4.7k • written 12.7 years ago by ▴ 660
22 results • Page 1 of 1
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