Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
questions
4
votes
4
replies
507
views
Addressing two nuisance factors in RNAseq
bulkRNAseq
updated 24 days ago by
ATpoint
88k • written 25 days ago by
jkim
▴ 190
2
votes
6
replies
1.2k
views
create a gene count matrix csv file from seurat object
Seurat
sparseMatrix
13 months ago by
jkim
▴ 190
0
votes
0
replies
426
views
% rRNAs discrepancy between sortMeRNA and read count matrices
rRNA
17 months ago by
jkim
▴ 190
3
votes
3
replies
1.5k
views
Merge fastq files across different lanes in Nextflow
Nextflow
Fastq
19 months ago by
jkim
▴ 190
4
votes
3
replies
984
views
Batch effect consideration (re-seq the same sample twice)
RNA-seq
batch-effect
updated 20 months ago by
Ram
45k • written 20 months ago by
jkim
▴ 190
4
votes
4
replies
1.4k
views
One sample has quite different # of reads from different lanes.
demultiplexing
illumina
fastq
21 months ago by
jkim
▴ 190
3
votes
5
replies
1.8k
views
Snakemake + singularity fails to locate bwa index files.
singularity
snakemake
bwa
updated 2.7 years ago by
Jeremy Leipzig
23k • written 2.7 years ago by
jkim
▴ 190
3
votes
7
replies
2.9k
views
Read coverage shows a difference in IGV
coverage
BAM
2.7 years ago by
jkim
▴ 190
4
votes
7
replies
2.2k
views
Filter out reads with hidden tags in bam files
BAM
samtools
2.8 years ago by
jkim
▴ 190
3
votes
3
replies
1.1k
views
DEGs with uninsteresed sample files
design
bulkRNAseq
DEG
matrix
updated 3.7 years ago by
swbarnes2
14k • written 3.7 years ago by
jkim
▴ 190
2
votes
2
replies
2.2k
views
Snakemake (MissingOutputException) doesn't seem to find output files.
Snakemake
4.2 years ago by
jkim
▴ 190
1
vote
5
replies
3.1k
views
Retrieve all compound ID, Description from a ko ID
KEGG
REST
API
updated 6.0 years ago by
AK
★ 2.2k • written 6.4 years ago by
jkim
▴ 190
6
votes
3
replies
6.2k
views
Building RNAseq pipeline STAR-RSEM-tximport-DESeq2
RNA-Seq
pipeline
updated 7.3 years ago by
Matteo Schiavinato
★ 3.7k • written 7.3 years ago by
jkim
▴ 190
13 results • Page
1 of 1
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6