User: md.rahman

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md.rahman10
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Posts by md.rahman

<prev • 3 results • page 1 of 1 • next >
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Comment: A: Gene Set Clustering based on Functional annotation (GeneSCF)
... Thank you very much. It works perfectly, exactly what I wanted. I have other organism's gene name in my list (Plasmodium, Cryptosporadium, Toxoplasma, Babesia etc). How can I map my gene list for other organisms? In the organism codes we have only GeneDB_Pfalciparum. Is there any way to map for othe ...
written 8 months ago by md.rahman10
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Comment: A: Gene Set Clustering based on Functional annotation (GeneSCF)
... Hi there, I was trying to run genescf. 1st I tried with my raw csv file for multiple organisms. But getting errors. I have changed my csv format to text , each line one gene name and ran it for single organism. Still getting the error. anybody can help me? Is there any way to run it for multiple org ...
written 8 months ago by md.rahman10
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Replacing gene name in a csv file with corresponding GO/KEGG term
... Hi there, I have a list of gene name in a csv file (orthofinder output). I want to replace these names with respective GO or KEGG terms. Any suggestions? I was trying "genescf" but getting the following error: [zillur@genomics Results_Nov15]$ ./../../../genescf/geneSCF-master-source-v1.1- ...
software error gene genome eggnog genescf written 8 months ago by md.rahman10 • updated 8 months ago by EagleEye4.8k

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