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1
vote
0
replies
19k
views
Comment:
C: Command to extract SNPs from VCF file using bcftool
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
3.1k
views
Comment:
C: samtools mpeileup: extract SNPs between individuals only (discard SNPs betn indi
9.6 years ago by
Jorge Amigo
14k
8
votes
1
reply
19k
views
Answer:
A: Command to extract SNPs from VCF file using bcftool
9.6 years ago by
Jorge Amigo
14k
0
votes
1
reply
3.1k
views
Answer:
A: samtools mpeileup: extract SNPs between individuals only (discard SNPs betn indi
9.6 years ago by
Jorge Amigo
14k
1
vote
1
reply
1.8k
views
Comment:
C: How to get the SNP statistics for Hg19
9.6 years ago by
Jorge Amigo
14k
2
votes
1
reply
2.6k
views
Comment:
C: Any tool to get SNP wise stat from VCF
9.6 years ago by
Jorge Amigo
14k
2
votes
1
reply
2.6k
views
Answer:
A: Any tool to get SNP wise stat from VCF
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
4.9k
views
Comment:
C: Bcftools equivalent of vcf-merge R?
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
6.1k
views
Comment:
C: Print all rows that are in specified value range based on specific column as pai
9.6 years ago by
Jorge Amigo
14k
0
votes
1
reply
6.1k
views
Comment:
C: Print all rows that are in specified value range based on specific column as pai
9.6 years ago by
Jorge Amigo
14k
0
votes
1
reply
6.1k
views
Comment:
C: Print all rows that are in specified value range based on specific column as pai
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
22k
views
Comment:
C: Coverage In Bam File - Bases And Overall Count
9.6 years ago by
Jorge Amigo
14k
2
votes
1
reply
6.1k
views
Answer:
A: Print all rows that are in specified value range based on specific column as pai
9.6 years ago by
Jorge Amigo
14k
1
vote
0
replies
4.4k
views
Comment:
C: 1000 GENOME RETRIEVE DATA
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
39k
views
Comment:
C: New Fasta Sequence From Reference Fasta And Variant Calls File?
9.6 years ago by
Jorge Amigo
14k
0
votes
1
reply
4.4k
views
Comment:
C: 1000 GENOME RETRIEVE DATA
9.6 years ago by
Jorge Amigo
14k
3
votes
1
reply
4.4k
views
Answer:
A: 1000 GENOME RETRIEVE DATA
9.6 years ago by
Jorge Amigo
14k
0
votes
1
reply
39k
views
Comment:
C: New Fasta Sequence From Reference Fasta And Variant Calls File?
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
2.1k
views
Comment:
C: How to remove the last character "," from each row in bed file?
9.6 years ago by
Jorge Amigo
14k
3
votes
0
replies
2.1k
views
Answer:
A: How to remove the last character "," from each row in bed file?
9.6 years ago by
Jorge Amigo
14k
2
votes
1
reply
9.6k
views
Comment:
C: Finding a specific gene in a fastq file without mapping the reads?
9.6 years ago by
Jorge Amigo
14k
0
votes
1
reply
7.9k
views
Answer:
A: Error while trying to get consensus Fastq from BAM
9.6 years ago by
Jorge Amigo
14k
4
votes
1
reply
7.9k
views
Answer:
A: Error while trying to get consensus Fastq from BAM
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
7.9k
views
Comment:
C: Error while trying to get consensus Fastq from BAM
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
2.4k
views
Comment:
C: Risk allele frequency via 1000 genome browser
9.6 years ago by
Jorge Amigo
14k
1
vote
0
replies
1.8k
views
Answer:
A: Counting reads per codon
9.6 years ago by
Jorge Amigo
14k
1
vote
0
replies
3.9k
views
Answer:
A: Missing alleles for a genotype in UYG VCF file
9.6 years ago by
Jorge Amigo
14k
0
votes
1
reply
4.9k
views
Answer:
A: Bcftools equivalent of vcf-merge R?
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
47k
views
Comment:
C: Extract subset of samples from multigenome vcf file
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
2.0k
views
Comment:
C: Significant difference between Grch37 and human_g1k_37
9.6 years ago by
Jorge Amigo
14k
1
vote
1
reply
9.6k
views
Comment:
C: Finding specific gene in reads
9.6 years ago by
Jorge Amigo
14k
0
votes
1
reply
9.6k
views
Comment:
C: Finding specific gene in reads
9.6 years ago by
Jorge Amigo
14k
5
votes
1
reply
9.6k
views
Answer:
A: Finding specific gene in reads
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
3.6k
views
Comment:
C: why is this example homozygous 0/0 ?
9.6 years ago by
Jorge Amigo
14k
3
votes
1
reply
3.6k
views
Answer:
A: why is this example homozygous 0/0 ?
9.6 years ago by
Jorge Amigo
14k
1
vote
1
reply
47k
views
Comment:
C: Extract subset of samples from multigenome vcf file
9.6 years ago by
Jorge Amigo
14k
1
vote
0
replies
7.6k
views
Comment:
C: How to interpret and extract from a Vcf file Genotype informations as values
9.6 years ago by
Jorge Amigo
14k
1
vote
1
reply
7.6k
views
Comment:
C: How to interpret and extract from a Vcf file Genotype informations as values
9.6 years ago by
Jorge Amigo
14k
12
votes
0
replies
47k
views
Answer:
A: Extract subset of samples from multigenome vcf file
9.6 years ago by
Jorge Amigo
14k
0
votes
0
replies
2.7k
views
Answer:
A: convert2annovar Skipped invalid alternative alleles found in input file
9.7 years ago by
Jorge Amigo
14k
0
votes
0
replies
4.0k
views
Comment:
C: Combine multiple vcf (or gVCF) from Ion Torrent
9.9 years ago by
Jorge Amigo
14k
3
votes
1
reply
4.0k
views
Answer:
A: Combine multiple vcf (or gVCF) from Ion Torrent
9.9 years ago by
Jorge Amigo
14k
5
votes
0
replies
23k
views
Answer:
A: Gff Or Bed File For Hg19 Genome
9.9 years ago by
Jorge Amigo
14k
12
votes
2
replies
43k
views
Answer:
A: Ti/Tv Ratio Confirms Snp Discovery. Is This A General Rule?
9.9 years ago by
Jorge Amigo
14k
3
votes
0
replies
3.6k
views
Answer:
A: How many SNPs are sufficiant for Sample identify uniquely?
10.0 years ago by
Jorge Amigo
14k
1
vote
0
replies
2.5k
views
Comment:
C: Same locus, more rs IDs
10.0 years ago by
Jorge Amigo
14k
1
vote
1
reply
7.0k
views
Answer:
A: Counting number of bases covered across multiple bam files
10.0 years ago by
Jorge Amigo
14k
0
votes
0
replies
6.3k
views
Answer:
A: How can I get .bed file that have unique Entrez gene id (or symbol) for deeptool
10.1 years ago by
Jorge Amigo
14k
2
votes
0
replies
3.1k
views
Comment:
C: Replace REF and ALT columns based on the GT of one sample in a VCF file
10.1 years ago by
Jorge Amigo
14k
0
votes
0
replies
5.0k
views
Comment:
C: How to obtain ancestral alleles based on Hg19 genome coordinates?
10.1 years ago by
Jorge Amigo
14k
884 results • Page
7 of 18
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