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Comment: C: How to use samtools to assembly a gene?
10.9 years ago by Jorge Amigo 14k
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1
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7.0k
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Comment: C: How to use samtools to assembly a gene?
10.9 years ago by Jorge Amigo 14k
0
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1
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6.6k
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Answer: Answer: Get alternate / total allele counts for 1000 Genomes super-populations
updated 3.7 years ago by 45k • written 10.9 years ago by 14k
2
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1
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12k
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Comment: Comment: How to keep the header when I'm extracting a specific region from a bam file
updated 3.7 years ago by 45k • written 10.9 years ago by 14k
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1
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25k
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Answer: Answer: Addin gene information to VCF file
updated 3.7 years ago by 45k • written 10.9 years ago by 14k
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0
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2.0k
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Answer: A: perl, extract every 40th seg but stop after getting 300,000 sequence
11.0 years ago by Jorge Amigo 14k
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21k
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Comment: C: VCF to FASTA
11.0 years ago by Jorge Amigo 14k
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2
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9.0k
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Answer: Answer: Filter a bam file
updated 3.7 years ago by 45k • written 11.0 years ago by 14k
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1
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4.0k
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Answer: A: Convert plink to classical BED
11.0 years ago by Jorge Amigo 14k
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4.7k
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Answer: A: Samtools: append output
11.0 years ago by Jorge Amigo 14k
5
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1
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9.4k
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Answer: A: How to choose vcf-compare options
11.0 years ago by Jorge Amigo 14k
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1
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7.4k
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Answer: A: Bedtools Compare Multiple Bed Files to one Bed files?
11.0 years ago by Jorge Amigo 14k
0
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1
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8.1k
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Comment: C: Check if REF allele is minor allele in any variant
11.0 years ago by Jorge Amigo 14k
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2
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8.1k
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Comment: C: Check if REF allele is minor allele in any variant
11.0 years ago by Jorge Amigo 14k
5
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1
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8.1k
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Answer: A: Check if REF allele is minor allele in any variant
11.0 years ago by Jorge Amigo 14k
1
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0
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8.1k
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Answer: A: Can't locate <file> in @INC (@INC contains <file> ... )
11.0 years ago by Jorge Amigo 14k
2
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0
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14k
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Comment: C: Filter genotype in multi-sample VCF file
11.0 years ago by Jorge Amigo 14k
2
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1
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6.3k
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Answer: A: bam file assembly (1000 genomes)
11.0 years ago by Jorge Amigo 14k
2
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1
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4.8k
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Answer: A: Ngs Question ~ Consensus
11.0 years ago by Jorge Amigo 14k
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1
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14k
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Comment: C: Filter genotype in multi-sample VCF file
11.0 years ago by Jorge Amigo 14k
8
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1
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14k
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Answer: A: Filter genotype in multi-sample VCF file
11.0 years ago by Jorge Amigo 14k
2
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0
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3.9k
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Answer: Answer: Multiple vcf files with plink
updated 4.6 years ago by 45k • written 11.1 years ago by 14k
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0
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5.6k
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Comment: Comment: How do we distinguish between SNP/INDEL/SV in 1000 genomes Phase 3 data
updated 4.6 years ago by 45k • written 11.1 years ago by 14k
4
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1
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5.6k
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Answer: Answer: How do we distinguish between SNP/INDEL/SV in 1000 genomes Phase 3 data
updated 4.6 years ago by 45k • written 11.1 years ago by 14k
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1
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4.8k
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Comment: C: Get FASTA Sequence for comparison from SNPs
updated 4.6 years ago by 45k • written 11.1 years ago by 14k
1
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0
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3.4k
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Comment: C: Total Samples In 1000 Genomes Vcf File
11.1 years ago by Jorge Amigo 14k
1
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1
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11k
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Answer: Answer: MAF (minor allele frequency) calculation for finding rare variants from TCGA
updated 3.8 years ago by 45k • written 11.1 years ago by 14k
1
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0
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4.8k
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Answer: A: Get FASTA Sequence for comparison from SNPs
updated 4.6 years ago by 45k • written 11.1 years ago by 14k
1
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0
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4.8k
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Comment: C: force reads to map to a particular genome region
11.1 years ago by Jorge Amigo 14k
0
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1
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4.8k
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Comment: C: force reads to map to a particular genome region
11.1 years ago by Jorge Amigo 14k
9
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7
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4.8k
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force reads to map to a particular genome region
alignment
updated 4.6 years ago by 45k • written 11.1 years ago by 14k
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0
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8.6k
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Comment: C: Annovar Annotation With 1000G
11.1 years ago by Jorge Amigo 14k
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0
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3.9k
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Comment: C: split 1000genomes .vcf per individual
11.4 years ago by Jorge Amigo 14k
0
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1
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6.9k
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Comment: C: Filtration of bam file but with header
11.4 years ago by Jorge Amigo 14k
0
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0
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3.9k
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Answer: A: split 1000genomes .vcf per individual
11.4 years ago by Jorge Amigo 14k
0
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0
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12k
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Answer: A: What Does Distinguish Header From Content In Bed Files?
11.5 years ago by Jorge Amigo 14k
7
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1
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34k
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Answer: A: Colors in IGV
11.5 years ago by Jorge Amigo 14k
9
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3
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3.2k
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Tool: PLINK 1.90 alpha
plink
updated 2.4 years ago by 45k • written 11.5 years ago by 14k
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0
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19k
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Comment: Comment: Biostar 2.0 released
updated 4.6 years ago by 45k • written 11.6 years ago by 14k
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0
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19k
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Comment: Comment: Biostar 2.0 released
updated 4.6 years ago by 45k • written 11.6 years ago by 14k
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0
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9.1k
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Comment: C: Vcf Tools For Fst
11.6 years ago by Jorge Amigo 14k
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0
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9.1k
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Comment: C: Vcf Tools For Fst
11.6 years ago by Jorge Amigo 14k
4
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0
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13k
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Answer: A: Variant Function Prediction
11.6 years ago by Jorge Amigo 14k
0
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2
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9.1k
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Answer: A: Vcf Tools For Fst
11.6 years ago by Jorge Amigo 14k
0
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0
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4.0k
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Answer: A: Count The Coverage Rate Of A Bacterial Genome'S Bam File
11.6 years ago by Jorge Amigo 14k
1
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0
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6.8k
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Answer: A: Snp And Mismatches
11.7 years ago by Jorge Amigo 14k
0
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1
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4.9k
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Comment: Comment: Can We Call The Variants Using Haplotype Caller Or Unified Genotyper Without Dbs
updated 4.4 years ago by 45k • written 11.8 years ago by 14k
2
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1
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4.9k
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Answer: Answer: Can We Call The Variants Using Haplotype Caller Or Unified Genotyper Without Dbs
updated 4.4 years ago by 45k • written 11.8 years ago by 14k
0
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0
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18k
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Comment: C: Huge Ngs Data Storage And Transferring
11.9 years ago by Jorge Amigo 14k
0
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0
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6.8k
views
Comment: C: Produce Bed File With Gaps In Coverage From A Bam File
11.9 years ago by Jorge Amigo 14k
884 results • Page 9 of 18
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