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5
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Answer: Answer: what is IGV visualization lighter color variants stand for
13 months ago by Jorge Amigo 14k
1
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0
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737
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Answer: Answer: Count values based on condition
23 months ago by Jorge Amigo 14k
3
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0
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1.2k
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Answer: Answer: How to distinguish INDELs from SNPs.
2.4 years ago by Jorge Amigo 14k
1
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1.5k
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Answer: Answer: Detecting chromosone notation in vcf files
2.4 years ago by Jorge Amigo 14k
1
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0
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2.0k
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Answer: Answer: Compare two VCF files in Python
2.6 years ago by Jorge Amigo 14k
2
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0
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1.3k
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Answer: Answer: How to adjust sequence line to 60bp?
2.7 years ago by Jorge Amigo 14k
0
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0
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802
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Answer: Answer: Platypus
2.7 years ago by Jorge Amigo 14k
3
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1
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1.1k
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Answer: Answer: Convert a VCF-file in a user specific Format
2.7 years ago by Jorge Amigo 14k
3
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1
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964
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Answer: Answer: Count number of occurrences an annotation in a multisample vcf split into multip
2.8 years ago by Jorge Amigo 14k
2
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1
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1.5k
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Answer: Answer: Sum up value within a interval
2.8 years ago by Jorge Amigo 14k
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1
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1.2k
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Answer: Answer: annotate sites with gene info
2.8 years ago by Jorge Amigo 14k
3
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0
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4.8k
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Answer: Answer: How to generate start & end coordinates for each chromosome of human ref genome
2.8 years ago by Jorge Amigo 14k
1
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2.7k
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Answer: Answer: Extract chromosome 1 - 22 ,X and Y from BAM file
2.9 years ago by Jorge Amigo 14k
2
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1
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1.0k
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Answer: Answer: How do I write the regex expression for the line?
2.9 years ago by Jorge Amigo 14k
1
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1
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2.6k
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Answer: Answer: Installing Bedtools with Cygwin fails.
3.0 years ago by Jorge Amigo 14k
0
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0
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982
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Answer: Answer: Find all genes in multiple regions
3.0 years ago by Jorge Amigo 14k
2
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1
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1.1k
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Answer: Answer: How to capture the position of SNPs from the gene's locations
3.0 years ago by Jorge Amigo 14k
2
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1
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2.8k
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Answer: Answer: Bamtools stats and samtools flagstat produce different results and confusing my
3.0 years ago by Jorge Amigo 14k
1
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1
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2.1k
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Answer: Answer: How do I interpret a 200bp reduction of coverage in a gene exon?
3.0 years ago by Jorge Amigo 14k
5
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1
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2.6k
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Answer: Answer: How to filter a vcf file based on genotype of first two samples
3.0 years ago by Jorge Amigo 14k
1
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1
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5.2k
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Answer: Answer: How to convert maf to vcf while retaining original mutation notations?
3.0 years ago by Jorge Amigo 14k
1
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1
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1.9k
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Answer: Answer: alignement and Variant calling with BWA and samtools
3.0 years ago by Jorge Amigo 14k
2
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1
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2.6k
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Answer: Answer: How to filter a vcf file based on genotype of first two samples
3.0 years ago by Jorge Amigo 14k
1
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0
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899
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Answer: Answer: SNP count in a set of genomic regions
3.0 years ago by Jorge Amigo 14k
1
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0
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798
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Answer: Answer: two allele frequency
3.0 years ago by Jorge Amigo 14k
2
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0
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2.6k
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Answer: Answer: 1000G Tabix download: EOF marker is absent
3.0 years ago by Jorge Amigo 14k
0
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0
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3.1k
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Answer: Answer: How to get SNPs genotype matrix from vcf file for JoinMap analysis?
3.0 years ago by Jorge Amigo 14k
0
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0
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1.8k
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Answer: Answer: ExomeDepth negative BF (bayesian factor) values meaning
3.0 years ago by Jorge Amigo 14k
0
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0
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2.7k
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Answer: Answer: How to extract specific fasta files ?
3.0 years ago by Jorge Amigo 14k
3
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0
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3.0k
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Answer: Answer: Any standalone tool for INDEL Realignment?
3.1 years ago by Jorge Amigo 14k
0
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0
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1.5k
views
Answer: Answer: Replace headers of fasta while with simplified headers from another file
3.1 years ago by Jorge Amigo 14k
1
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1
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1.2k
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Answer: Answer: calculation synonymous and non-synonymous allele counts in a VCF file
3.1 years ago by Jorge Amigo 14k
2
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0
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1.3k
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Answer: Answer: BAM file download for just a few genes
3.1 years ago by Jorge Amigo 14k
1
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0
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1.5k
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Answer: Answer: Is there any gene nomenclature conversion tool that recognizes old names?
3.1 years ago by Jorge Amigo 14k
1
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0
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1.3k
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Answer: Answer: How to merge several BED files to create a comprehensive overview file
3.1 years ago by Jorge Amigo 14k
2
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0
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7.2k
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Answer: Answer: how to split multi-fasta file into single fasta file named by header
3.1 years ago by Jorge Amigo 14k
1
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0
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5.3k
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Answer: A: How to extract a sequence below a fasta header (">") from a fasta file ?
3.3 years ago by Jorge Amigo 14k
1
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0
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1.0k
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Answer: A: editing gtf file
3.3 years ago by Jorge Amigo 14k
1
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1
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935
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Answer: A: how to filter sequence database with bash?
3.3 years ago by Jorge Amigo 14k
1
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0
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2.5k
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Answer: A: Issues with reading .bed files and compressing output in a specific format
3.3 years ago by Jorge Amigo 14k
0
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0
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1.4k
views
Answer: A: how to combine two bed files using the same ID information
3.3 years ago by Jorge Amigo 14k
2
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1
reply
2.4k
views
Answer: A: Is there a tool to predict if a missense variant causes a loss of function on th
3.3 years ago by Jorge Amigo 14k
0
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0
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628
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Answer: A: Heterozygous types in VCF
3.3 years ago by Jorge Amigo 14k
1
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1
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6.6k
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Answer: A: Failed to open plain.vcf: unknown file type
3.4 years ago by Jorge Amigo 14k
1
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0
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2.8k
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Answer: A: How to create a SNP VCF file?
3.4 years ago by Jorge Amigo 14k
1
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0
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2.6k
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Answer: A: How to count the number of codons in a frame or order using the equation?
3.4 years ago by Jorge Amigo 14k
2
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1
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684
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Answer: A: Is this a novel SNV?
3.4 years ago by Jorge Amigo 14k
3
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0
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825
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Answer: A: Masking Y chromosomes
3.5 years ago by Jorge Amigo 14k
4
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0
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3.4k
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Answer: A: Why is gnomAD AF vs gnomAD exome AF so different?
3.5 years ago by Jorge Amigo 14k
8
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2
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1.2k
views
Answer: A: Intronless genes in the human genome annotation
3.5 years ago by Jorge Amigo 14k
412 results • Page 1 of 9
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