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Answer: Answer: IGV coverage bar has color, but no mutation?
7 weeks ago by Amitm ★ 2.1k
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0
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855
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Comment: Comment: R Columns to Seurat Object
8 weeks ago by Amitm ★ 2.1k
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1
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855
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Comment: Comment: R Columns to Seurat Object
8 weeks ago by Amitm ★ 2.1k
1
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1
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399
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Answer: Answer: Need help understanding reference transcriptome and where to download
8 weeks ago by Amitm ★ 2.1k
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1
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855
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Comment: Comment: R Columns to Seurat Object
8 weeks ago by Amitm ★ 2.1k
0
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1
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855
views
Answer: Answer: R Columns to Seurat Object
8 weeks ago by Amitm ★ 2.1k
1
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1
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288
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Comment: Comment: Mutation callin For RNASeq
3 months ago by Amitm ★ 2.1k
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0
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854
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Comment: Comment: Can't convert SRA to FASTQ with fasterq-dump. fasterq-dump was killed (signal 9
3 months ago by Amitm ★ 2.1k
2
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1
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409
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Answer: Answer: How to download the entire Run from Basespace illumina
3 months ago by Amitm ★ 2.1k
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0
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2.6k
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Comment: Comment: how to interpret a CNV scatter plot
4 months ago by Amitm ★ 2.1k
0
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1
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4.0k
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Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.2 years ago by Amitm ★ 2.1k
0
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1
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4.0k
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Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.2 years ago by Amitm ★ 2.1k
0
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1
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4.0k
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Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.2 years ago by Amitm ★ 2.1k
0
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1
reply
4.0k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.2 years ago by Amitm ★ 2.1k
1
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1
reply
1.1k
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Comment: C: Error in GATK HaplotypeCaller
2.2 years ago by Amitm ★ 2.1k
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1
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1.1k
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Comment: C: Error in GATK HaplotypeCaller
2.2 years ago by Amitm ★ 2.1k
0
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1
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4.0k
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Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.2 years ago by Amitm ★ 2.1k
0
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2
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4.0k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.2 years ago by Amitm ★ 2.1k
3
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1
reply
577
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Answer: C: Detecting CNVs from BAM file
2.2 years ago by Amitm ★ 2.1k
1
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1
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4.0k
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Answer: A: STAR and StringTie to identify novel isoforms (please check my work)
2.2 years ago by Amitm ★ 2.1k
0
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0
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856
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Comment: C: How to create coverage graph/plot for an entire Illumina run
2.3 years ago by Amitm ★ 2.1k
1
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1
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1.1k
views
Comment: C: Platypus variant caller error
2.3 years ago by Amitm ★ 2.1k
1
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1
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1.1k
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Comment: C: Platypus variant caller error
2.3 years ago by Amitm ★ 2.1k
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2
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1.1k
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Comment: C: Platypus variant caller error
2.3 years ago by Amitm ★ 2.1k
0
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1
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878
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Comment: C: How to identify mRNA 3' UTR by bulk RNA-seq data
2.4 years ago by Amitm ★ 2.1k
0
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1
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942
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Comment: C: Platypus variant caller error
2.5 years ago by Amitm ★ 2.1k
1
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2
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2.6k
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Comment: C: how to interpret a CNV scatter plot
2.5 years ago by Amitm ★ 2.1k
3
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1
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2.6k
views
Answer: C: how to interpret a CNV scatter plot
2.5 years ago by Amitm ★ 2.1k
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0
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1.3k
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Comment: C: Annotating VCF files
2.5 years ago by Amitm ★ 2.1k
0
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0
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779
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Comment: C: Creating bed file for gene specific variant extraction from VCF file
2.5 years ago by Amitm ★ 2.1k
1
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1
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1.3k
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Comment: C: De novo transcriptome from PE reads with high multi-mapping rate (Bowtie2)
2.5 years ago by Amitm ★ 2.1k
0
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2
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779
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Answer: A: Creating bed file for gene specific variant extraction from VCF file
2.5 years ago by Amitm ★ 2.1k
0
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1
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1.1k
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Comment: C: WES or WGS
2.5 years ago by Amitm ★ 2.1k
0
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1
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3.7k
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Comment: C: how to get the installation histort of conda
2.5 years ago by Amitm ★ 2.1k
2
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1
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1.4k
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Answer: A: TSS of canonical transcripts
2.5 years ago by Amitm ★ 2.1k
0
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1
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618
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Comment: C: Getting huge size of CNV region from CNV-kit with hybrid data.
2.6 years ago by Amitm ★ 2.1k
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0
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1.8k
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Comment: C: Stringtie duplicate transcripts
3.0 years ago by Amitm ★ 2.1k
0
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0
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1.2k
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Comment: C: VCF to maf
3.0 years ago by Amitm ★ 2.1k
1
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1
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997
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Comment: C: Suggestion needed for finding fusion transcripts
3.1 years ago by Amitm ★ 2.1k
1
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0
replies
660
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Answer: C: Classifying normal vs cancer tissues from mutational data
3.2 years ago by Amitm ★ 2.1k
4
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2
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997
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Answer: C: Suggestion needed for finding fusion transcripts
3.2 years ago by Amitm ★ 2.1k
2
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1
reply
963
views
Answer: C: Interested in RNA-Seq splicing analysis - go for paired-end shorter or single-en
3.2 years ago by Amitm ★ 2.1k
2
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0
replies
696
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Answer: C: How I deal with redundant genes in microarray
3.2 years ago by Amitm ★ 2.1k
0
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0
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1.7k
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Comment: C: Low percent of RNA-seq reads mapping
3.2 years ago by Amitm ★ 2.1k
0
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1
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1.7k
views
Comment: C: Low percent of RNA-seq reads mapping
3.2 years ago by Amitm ★ 2.1k
2
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1
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1.7k
views
Answer: A: Low percent of RNA-seq reads mapping
3.2 years ago by Amitm ★ 2.1k
0
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0
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879
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Comment: C: database for mouse tumor supressor genes and oncogenes
3.2 years ago by Amitm ★ 2.1k
1
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0
replies
668
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Comment: C: Call CNVs using gene positions
3.2 years ago by Amitm ★ 2.1k
0
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0
replies
480
views
Comment: C: Processed loci from Cufflinks
3.2 years ago by Amitm ★ 2.1k
1
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0
replies
724
views
Comment: C: Using dbSNP dataset
3.2 years ago by Amitm ★ 2.1k
271 results • Page 1 of 6
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