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5
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1
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1.1k
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Answer: A: What is a better strategy for finding novel transcripts?
3.4 years ago by Amitm ★ 2.1k
0
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0
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2.7k
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Answer: A: What is the state of multi-omics dataset ?
updated 3.4 years ago by 39k • written 7.3 years ago by ★ 2.1k
0
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1
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2.8k
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Comment: C: Ballgown plotTranscripts function
updated 3.4 years ago by 39k • written 7.3 years ago by ★ 2.1k
1
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0
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10k
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Answer: C: how to download gene annotation bed file from ensembl?
updated 3.4 years ago by 39k • written 7.4 years ago by ★ 2.1k
1
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0
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2.5k
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Comment: C: analyzing RNAseq data in cytoscape
updated 3.4 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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2
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2.5k
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Comment: Comment: analyzing RNAseq data in cytoscape
updated 12 months ago by 39k • written 7.4 years ago by ★ 2.1k
1
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0
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2.3k
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Answer: A: Agilent SureSelect design miss some target regions
updated 3.4 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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2
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2.5k
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Comment: C: Could you explain the percentage of A, C , G, T in hg19 ?
updated 3.4 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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1
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3.1k
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Answer: C: Obtaining length and %GC of genes using Biomart
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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0
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8.7k
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Comment: Comment: Calculating Mapping Coverage
updated 19 months ago by 39k • written 7.4 years ago by ★ 2.1k
1
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0
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7.2k
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Answer: A: RefSeq Ids(NM*, NR*) to ensemble transcript Ids (ENST*)
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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0
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2.8k
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Comment: C: Somatic allele frequency from TCGA in non-coding DNA
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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0
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2.8k
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Comment: C: Somatic allele frequency from TCGA in non-coding DNA
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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0
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2.1k
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Comment: C: co-expression of genes in normal and cancer
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
1
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0
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2.7k
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Comment: C: htseq-count produces no features amid alignment
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
2
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1
reply
14k
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Comment: C: How to efficiently remove a list of reads from BAM file?
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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1
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2.4k
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Comment: C: Pipeline for RNA-seq analysis
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
1
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0
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6.5k
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Answer: A: Intersect multiple BED files
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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0
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1.5k
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Comment: C: new gene discovery
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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2
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11k
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Comment: C: MarkDuplicates memory issue
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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0
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1.2k
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Comment: C: Download multiple RNAseq experiments
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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0
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4.3k
views
Comment: A: Can I use sorted bam files from STAR with Stringtie?
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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0
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4.3k
views
Answer: A: Can I use sorted bam files from STAR with Stringtie?
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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1
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4.2k
views
Comment: C: how to add a pseduo gene into a GTF file?
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
1
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0
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4.3k
views
Comment: C: How can I detect lncRNA?
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
1
vote
1
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4.3k
views
Answer: A: How can I detect lncRNA?
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
0
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1
reply
4.3k
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Comment: C: Fusion gene detection software
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
1
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1
reply
4.3k
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Answer: A: Fusion gene detection software
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
2
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1
reply
2.8k
views
Answer: A: RNA Expression Transcript Level Collapse
updated 3.6 years ago by 39k • written 8.0 years ago by ★ 2.1k
0
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0
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3.0k
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Comment: C: faster variant annotation for large VCFs
4.7 years ago by Amitm ★ 2.1k
0
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0
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3.4k
views
Comment: C: I can't convert the sam file to fastq file.
updated 4.7 years ago by 39k • written 7.3 years ago by ★ 2.1k
1
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1
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3.0k
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Comment: C: How can get MAF for set of SNPs from each population based on 1000 Genome?
updated 4.7 years ago by 85k • written 7.3 years ago by ★ 2.1k
1
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0
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3.0k
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Comment: C: How can get MAF for set of SNPs from each population based on 1000 Genome?
updated 4.7 years ago by 85k • written 7.3 years ago by ★ 2.1k
0
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0
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3.0k
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Comment: C: faster variant annotation for large VCFs
4.7 years ago by Amitm ★ 2.1k
0
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0
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3.9k
views
Comment: C: Pipeline of structural variation calling using multiple tools for multiple sampl
updated 4.7 years ago by 39k • written 7.3 years ago by ★ 2.1k
1
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1
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3.0k
views
Comment: C: Can RNA-Seq be Used to Predict Non-Synonymous Mutational Load in a Non-Matched S
updated 4.7 years ago by 39k • written 7.3 years ago by ★ 2.1k
3
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8
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3.0k
views
faster variant annotation for large VCFs
vcf variant annotation WGS
updated 4.8 years ago by 23k • written 4.8 years ago by ★ 2.1k
0
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1
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3.0k
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Comment: C: faster variant annotation for large VCFs
4.8 years ago by Amitm ★ 2.1k
0
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0
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5.1k
views
Comment: C: Removing everything after the last underscore in the header of a fastafile
4.8 years ago by Amitm ★ 2.1k
0
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1
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5.1k
views
Answer: A: Removing everything after the last underscore in the header of a fastafile
4.8 years ago by Amitm ★ 2.1k
1
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2
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6.2k
views
Answer: C: GISTIC input parameters.
4.8 years ago by Amitm ★ 2.1k
0
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1
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1.3k
views
Comment: C: Error : run cnvkit from bam
4.8 years ago by Amitm ★ 2.1k
0
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1
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1.3k
views
Comment: C: Error : run cnvkit from bam
4.8 years ago by Amitm ★ 2.1k
1
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1
reply
1.3k
views
Comment: C: Error : run cnvkit from bam
4.8 years ago by Amitm ★ 2.1k
3
votes
1
reply
1.7k
views
Answer: A: Different results for differentially expressed genes in RNA-seq analysis with cu
4.8 years ago by Amitm ★ 2.1k
0
votes
0
replies
850
views
Answer: A: What is a good way to compare the WES and panel seq results from the same set of
4.8 years ago by Amitm ★ 2.1k
0
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0
replies
975
views
Comment: C: Installation error pindel
4.8 years ago by Amitm ★ 2.1k
0
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1
reply
3.1k
views
Comment: C: FPKM matrix after stringtie using ballgown
4.8 years ago by Amitm ★ 2.1k
0
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1
reply
3.1k
views
Comment: C: FPKM matrix after stringtie using ballgown
4.8 years ago by Amitm ★ 2.1k
0
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1
reply
3.1k
views
Comment: C: FPKM matrix after stringtie using ballgown
4.8 years ago by Amitm ★ 2.1k
271 results • Page 2 of 6
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