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Comment: A: Can I use sorted bam files from STAR with Stringtie?
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
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Comment: C: how to add a pseduo gene into a GTF file?
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
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Comment: C: How can I detect lncRNA?
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
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1
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4.3k
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Comment: C: Fusion gene detection software
updated 3.5 years ago by 39k • written 7.4 years ago by ★ 2.1k
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3.0k
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Comment: C: faster variant annotation for large VCFs
4.7 years ago by Amitm ★ 2.1k
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3.4k
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Comment: C: I can't convert the sam file to fastq file.
updated 4.7 years ago by 39k • written 7.3 years ago by ★ 2.1k
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3.0k
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Comment: C: How can get MAF for set of SNPs from each population based on 1000 Genome?
updated 4.7 years ago by 85k • written 7.3 years ago by ★ 2.1k
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3.0k
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Comment: C: How can get MAF for set of SNPs from each population based on 1000 Genome?
updated 4.7 years ago by 85k • written 7.3 years ago by ★ 2.1k
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3.0k
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Comment: C: faster variant annotation for large VCFs
4.7 years ago by Amitm ★ 2.1k
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0
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3.9k
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Comment: C: Pipeline of structural variation calling using multiple tools for multiple sampl
updated 4.7 years ago by 39k • written 7.3 years ago by ★ 2.1k
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1
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3.0k
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Comment: C: Can RNA-Seq be Used to Predict Non-Synonymous Mutational Load in a Non-Matched S
updated 4.7 years ago by 39k • written 7.3 years ago by ★ 2.1k
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3.0k
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Comment: C: faster variant annotation for large VCFs
4.8 years ago by Amitm ★ 2.1k
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0
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5.1k
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Comment: C: Removing everything after the last underscore in the header of a fastafile
4.8 years ago by Amitm ★ 2.1k
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1
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1.3k
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Comment: C: Error : run cnvkit from bam
4.8 years ago by Amitm ★ 2.1k
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1
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1.3k
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Comment: C: Error : run cnvkit from bam
4.8 years ago by Amitm ★ 2.1k
1
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1
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1.3k
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Comment: C: Error : run cnvkit from bam
4.8 years ago by Amitm ★ 2.1k
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0
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974
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Comment: C: Installation error pindel
4.8 years ago by Amitm ★ 2.1k
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1
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3.1k
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Comment: C: FPKM matrix after stringtie using ballgown
4.8 years ago by Amitm ★ 2.1k
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1
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3.1k
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Comment: C: FPKM matrix after stringtie using ballgown
4.8 years ago by Amitm ★ 2.1k
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1
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3.1k
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Comment: C: FPKM matrix after stringtie using ballgown
4.8 years ago by Amitm ★ 2.1k
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1.7k
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Comment: C: I want to ask a question From COSMIC database
4.8 years ago by Amitm ★ 2.1k
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1.1k
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Comment: C: How to obtain alignment figure?
4.8 years ago by Amitm ★ 2.1k
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3.1k
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Comment: C: TLEN sam format
4.9 years ago by Amitm ★ 2.1k
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3.1k
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Comment: C: TLEN sam format
4.9 years ago by Amitm ★ 2.1k
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1
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2.1k
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Comment: C: Tool to process VCF file
4.9 years ago by Amitm ★ 2.1k
1
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1
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2.1k
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Comment: C: Tool to process VCF file
4.9 years ago by Amitm ★ 2.1k
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1
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1.5k
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Comment: C: How to find Novel transcripts
5.2 years ago by Amitm ★ 2.1k
1
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1
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1.5k
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Comment: C: StringTie inconsistent expression value
5.3 years ago by Amitm ★ 2.1k
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8.3k
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Comment: C: STAR do i need --twopassMode ?
5.3 years ago by Amitm ★ 2.1k
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1
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8.3k
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Comment: C: STAR do i need --twopassMode ?
5.3 years ago by Amitm ★ 2.1k
2
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1.3k
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Comment: C: Help exploring unknown region
5.3 years ago by Amitm ★ 2.1k
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1
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1.3k
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Comment: C: Help exploring unknown region
5.3 years ago by Amitm ★ 2.1k
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1.3k
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Comment: C: gene expression database for quary a gene
5.3 years ago by Amitm ★ 2.1k
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0
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988
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Comment: C: How do I normalize this data for plotting?
5.3 years ago by Amitm ★ 2.1k
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1
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1.3k
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Comment: C: VCF format tool question
5.4 years ago by Amitm ★ 2.1k
1
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1
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1.3k
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Comment: C: VCF format tool question
5.4 years ago by Amitm ★ 2.1k
1
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1
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6.5k
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Comment: C: HTSEq-Count returns 0 counts for all genes in the counts file!
5.4 years ago by Amitm ★ 2.1k
1
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0
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1.4k
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Comment: C: ExAC includes WES of phenotyped population
5.4 years ago by Amitm ★ 2.1k
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0
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7.8k
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Comment: C: From TCGA to GDC (Genomic data commons)
6.4 years ago by Amitm ★ 2.1k
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1
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3.0k
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Comment: C: RepeatMasker: createLib() Error
6.5 years ago by Amitm ★ 2.1k
1
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0
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1.5k
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Comment: C: For RNA seq data analysis
6.6 years ago by Amitm ★ 2.1k
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0
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8.1k
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Comment: C: STAR - genome indexes generation, genome file not created
6.6 years ago by Amitm ★ 2.1k
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1
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8.1k
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Comment: C: STAR - genome indexes generation, genome file not created
6.6 years ago by Amitm ★ 2.1k
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2
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1.5k
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Comment: C: For RNA seq data analysis
6.6 years ago by Amitm ★ 2.1k
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0
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4.9k
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Comment: C: Somatic mutations from RNA-Seq data of tumor vs. normal
6.6 years ago by Amitm ★ 2.1k
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1
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2.1k
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Comment: C: viewing microRNA in IGV
6.7 years ago by Amitm ★ 2.1k
1
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1
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4.1k
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Comment: C: Clarification of good pipeline for transcriptome assembly of RNA-seq data
6.7 years ago by Amitm ★ 2.1k
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2
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4.1k
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Comment: C: Clarification of good pipeline for transcriptome assembly of RNA-seq data
6.7 years ago by Amitm ★ 2.1k
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0
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1.6k
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Comment: C: Will you critique/rate my mRNA seq alignment analysis?
6.7 years ago by Amitm ★ 2.1k
1
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0
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2.0k
views
Comment: C: Annotate VCF with RepeatMasker
6.7 years ago by Amitm ★ 2.1k
188 results • Page 2 of 4
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