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622
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Answer: Answer: IGV coverage bar has color, but no mutation?
4 months ago by Amitm ★ 2.1k
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0
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1.4k
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Comment: Comment: R Columns to Seurat Object
4 months ago by Amitm ★ 2.1k
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1
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1.4k
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Comment: Comment: R Columns to Seurat Object
4 months ago by Amitm ★ 2.1k
1
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1
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529
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Answer: Answer: Need help understanding reference transcriptome and where to download
4 months ago by Amitm ★ 2.1k
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1
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1.4k
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Comment: Comment: R Columns to Seurat Object
4 months ago by Amitm ★ 2.1k
0
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1
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1.4k
views
Answer: Answer: R Columns to Seurat Object
4 months ago by Amitm ★ 2.1k
1
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1
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323
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Comment: Comment: Mutation callin For RNASeq
6 months ago by Amitm ★ 2.1k
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0
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1.1k
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Comment: Comment: Can't convert SRA to FASTQ with fasterq-dump. fasterq-dump was killed (signal 9
6 months ago by Amitm ★ 2.1k
2
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1
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611
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Answer: Answer: How to download the entire Run from Basespace illumina
6 months ago by Amitm ★ 2.1k
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0
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2.9k
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Comment: Comment: how to interpret a CNV scatter plot
7 months ago by Amitm ★ 2.1k
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1
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4.6k
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Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.4 years ago by Amitm ★ 2.1k
0
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1
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4.6k
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Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.4 years ago by Amitm ★ 2.1k
0
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1
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4.6k
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Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.4 years ago by Amitm ★ 2.1k
0
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1
reply
4.6k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.4 years ago by Amitm ★ 2.1k
1
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1
reply
1.2k
views
Comment: C: Error in GATK HaplotypeCaller
2.4 years ago by Amitm ★ 2.1k
0
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1
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1.2k
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Comment: C: Error in GATK HaplotypeCaller
2.4 years ago by Amitm ★ 2.1k
0
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1
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4.6k
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Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.5 years ago by Amitm ★ 2.1k
0
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2
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4.6k
views
Comment: C: STAR and StringTie to identify novel isoforms (please check my work)
2.5 years ago by Amitm ★ 2.1k
3
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1
reply
614
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Answer: C: Detecting CNVs from BAM file
2.5 years ago by Amitm ★ 2.1k
1
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1
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4.6k
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Answer: A: STAR and StringTie to identify novel isoforms (please check my work)
2.5 years ago by Amitm ★ 2.1k
0
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0
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892
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Comment: C: How to create coverage graph/plot for an entire Illumina run
2.5 years ago by Amitm ★ 2.1k
1
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1
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1.2k
views
Comment: C: Platypus variant caller error
2.5 years ago by Amitm ★ 2.1k
1
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1
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1.2k
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Comment: C: Platypus variant caller error
2.5 years ago by Amitm ★ 2.1k
0
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2
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1.2k
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Comment: C: Platypus variant caller error
2.5 years ago by Amitm ★ 2.1k
0
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1
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965
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Comment: C: How to identify mRNA 3' UTR by bulk RNA-seq data
2.6 years ago by Amitm ★ 2.1k
0
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1
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1.0k
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Comment: C: Platypus variant caller error
2.7 years ago by Amitm ★ 2.1k
1
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2
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2.9k
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Comment: C: how to interpret a CNV scatter plot
2.7 years ago by Amitm ★ 2.1k
3
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1
reply
2.9k
views
Answer: C: how to interpret a CNV scatter plot
2.7 years ago by Amitm ★ 2.1k
0
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0
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1.4k
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Comment: C: Annotating VCF files
2.7 years ago by Amitm ★ 2.1k
0
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0
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869
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Comment: C: Creating bed file for gene specific variant extraction from VCF file
2.7 years ago by Amitm ★ 2.1k
1
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1
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1.4k
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Comment: C: De novo transcriptome from PE reads with high multi-mapping rate (Bowtie2)
2.7 years ago by Amitm ★ 2.1k
0
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2
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869
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Answer: A: Creating bed file for gene specific variant extraction from VCF file
2.7 years ago by Amitm ★ 2.1k
0
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1
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1.1k
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Comment: C: WES or WGS
2.7 years ago by Amitm ★ 2.1k
0
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1
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4.2k
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Comment: C: how to get the installation histort of conda
2.7 years ago by Amitm ★ 2.1k
2
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1
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1.6k
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Answer: A: TSS of canonical transcripts
2.8 years ago by Amitm ★ 2.1k
0
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1
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654
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Comment: C: Getting huge size of CNV region from CNV-kit with hybrid data.
2.9 years ago by Amitm ★ 2.1k
0
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0
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1.9k
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Comment: C: Stringtie duplicate transcripts
3.2 years ago by Amitm ★ 2.1k
0
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0
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1.3k
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Comment: C: VCF to maf
3.2 years ago by Amitm ★ 2.1k
1
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1
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1.1k
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Comment: C: Suggestion needed for finding fusion transcripts
3.3 years ago by Amitm ★ 2.1k
1
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0
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700
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Answer: C: Classifying normal vs cancer tissues from mutational data
3.4 years ago by Amitm ★ 2.1k
4
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2
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1.1k
views
Answer: C: Suggestion needed for finding fusion transcripts
3.4 years ago by Amitm ★ 2.1k
2
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1
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1.0k
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Answer: C: Interested in RNA-Seq splicing analysis - go for paired-end shorter or single-en
3.4 years ago by Amitm ★ 2.1k
2
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0
replies
727
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Answer: C: How I deal with redundant genes in microarray
3.4 years ago by Amitm ★ 2.1k
0
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0
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1.9k
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Comment: C: Low percent of RNA-seq reads mapping
3.4 years ago by Amitm ★ 2.1k
0
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1
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1.9k
views
Comment: C: Low percent of RNA-seq reads mapping
3.4 years ago by Amitm ★ 2.1k
2
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1
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1.9k
views
Answer: A: Low percent of RNA-seq reads mapping
3.4 years ago by Amitm ★ 2.1k
0
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0
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920
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Comment: C: database for mouse tumor supressor genes and oncogenes
3.4 years ago by Amitm ★ 2.1k
1
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0
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704
views
Comment: C: Call CNVs using gene positions
3.4 years ago by Amitm ★ 2.1k
0
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0
replies
504
views
Comment: C: Processed loci from Cufflinks
3.4 years ago by Amitm ★ 2.1k
1
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0
replies
766
views
Comment: C: Using dbSNP dataset
3.4 years ago by Amitm ★ 2.1k
271 results • Page 1 of 6
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