User: conrad.stack

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Posts by conrad.stack

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Is there any reason not to run RS_ReadsOfInsert?
... I've included some background info after the questions, which are first in cases of TL;DR **Questions**: 1. Is it generally a best-practice to run `CircularConsensus` on SMRT cell DNAseq data before doing an analysis such as scaffolding or genome assembly? 2. Under what circumstances would yo ...
genome ccs rsii dna-seq pacbio written 14 months ago by conrad.stack0 • updated 14 months ago by Charles Warden5.1k
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Comment: C: Dowload all complete genomes grom GenBank .gbk full format
... There is a pretty decent R interface for downloading these data in the [ape][1] package. Check out [this tutorial][2] [1]: https://cran.r-project.org/web/packages/ape/index.html [2]: http://www.jcsantosresearch.org/Class_2014_Spring_Comparative/pdf/week_2/Jan_13_15_2015_GenBank_part_2.pdf ...
written 16 months ago by conrad.stack0

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