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6
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1.7k
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lncRNA machine learning
RNA-Seq
written 6.8 years ago by ▴ 60
4
votes
6
replies
7.6k
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download tumor and normal data from TCGA
next-gen
updated 5.4 years ago by ▴ 990 • written 6.9 years ago by ▴ 60
0
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0
replies
1.0k
views
Directionality Index analysis from Hi-C
Directionality Index
5.6 years ago by Ben ▴ 60
0
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0
replies
1.4k
views
Answer: A: cuffdiff long noncoding annotation vs full annotation
6.3 years ago by Ben ▴ 60
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0
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2.0k
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Answer: A: Prediction of lncRNA cis regulation
6.4 years ago by Ben ▴ 60
0
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1
reply
2.7k
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Comment: C: THOR a HMM based approach for differential peak calling with replicates
6.6 years ago by Ben ▴ 60
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2
replies
3.4k
views
Comment: C: how to calculate p value
6.6 years ago by Ben ▴ 60
0
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4
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3.4k
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how to calculate p value
RNA-Seq ChIP-Seq R
6.6 years ago by Ben ▴ 60
4
votes
2
replies
2.0k
views
extract the number of reads around TSS
ChIP-Seq
updated 6.7 years ago by 35k • written 6.7 years ago by ▴ 60
0
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0
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3.6k
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Comment: C: lncRNA target identification
6.8 years ago by Ben ▴ 60
0
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2
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1.7k
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Comment: C: lncRNA machine learning
6.8 years ago by Ben ▴ 60
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0
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2.1k
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Comment: C: Gene Ontology Analysis
6.8 years ago by Ben ▴ 60
1
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0
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2.6k
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Comment: C: Combining RNA-Seq and ChIP-Seq
6.8 years ago by Ben ▴ 60
0
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1
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2.5k
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Comment: C: Detection of aberrant mRNA splicing
6.8 years ago by Ben ▴ 60
0
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1
reply
5.4k
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Comment: C: TCGA & METABRIC Breast Cancer Subtype Survival Curve
6.8 years ago by Ben ▴ 60
0
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0
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1.7k
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Comment: C: Creating reproducible peak regions from multiple ChIP-seq studies
6.9 years ago by Ben ▴ 60
0
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0
replies
5.1k
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Comment: C: What's Pathway Enrichment Analysis?
6.9 years ago by Ben ▴ 60
0
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0
replies
1.1k
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Comment: C: Good Pipeline for ChIPexo
6.9 years ago by Ben ▴ 60
0
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1
reply
3.4k
views
Comment: C: extract list of positions from fasta file biopython
6.9 years ago by Ben ▴ 60
0
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0
replies
1.1k
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Comment: C: Peak ident near highly expressed genes
6.9 years ago by Ben ▴ 60
0
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1
reply
3.2k
views
Comment: C: Using RNA seq for genome annotation
6.9 years ago by Ben ▴ 60
0
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1
reply
1.6k
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Comment: C: tools or package for meta-analysis of chip-seq result
6.9 years ago by Ben ▴ 60
0
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1
reply
2.5k
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Comment: C: Enrichment analysis on TCGA data
6.9 years ago by Ben ▴ 60
0
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1
reply
3.2k
views
Comment: A: Using RNA seq for genome annotation
6.9 years ago by Ben ▴ 60
0
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0
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1.3k
views
Answer: A: Extract CDS from an extracted gene without bioperl
6.9 years ago by Ben ▴ 60
0
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1
reply
3.1k
views
Answer: A: Using efetch(biopython) to get the fasta file of an mRNA, as well as the exon lo
6.9 years ago by Ben ▴ 60
0
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0
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7.6k
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Comment: C: download tumor and normal data from TCGA
6.9 years ago by Ben ▴ 60
0
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0
replies
3.2k
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Comment: C: Bowtie2/HISAT using single-end to generate FPKM???
6.9 years ago by Ben ▴ 60
1
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0
replies
1.8k
views
Comment: C: To find Single Nucleotide polymorphism
6.9 years ago by Ben ▴ 60
3
votes
1
reply
1.8k
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how to detect RNA editing
RNA-Seq
6.9 years ago by Ben ▴ 60
0
votes
1
reply
2.0k
views
Comment: C: define alternative splice sites
6.9 years ago by Ben ▴ 60
0
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1
reply
7.6k
views
Comment: A: download tumor and normal data from TCGA
6.9 years ago by Ben ▴ 60
0
votes
1
reply
2.0k
views
Comment: A: Script for Gene Clustering.
6.9 years ago by Ben ▴ 60
0
votes
0
replies
7.4k
views
Answer: A: Best tool to find potential TF binding sites within a specific DNA sequence?
6.9 years ago by Ben ▴ 60
3
votes
3
replies
1.5k
views
p value of RNA editing
RNA-Seq
6.9 years ago by Ben ▴ 60
0
votes
1
reply
1.5k
views
Comment: A: p value of RNA editing
6.9 years ago by Ben ▴ 60
2
votes
0
replies
3.7k
views
Answer: A: Calculating p-Value for an observed/expected Ratio
6.9 years ago by Ben ▴ 60
6
votes
9
replies
3.6k
views
peak calling of ChIP-seq
ChIP-Seq
updated 11 months ago by 43k • written 7.0 years ago by ▴ 60
1
vote
3
replies
2.5k
views
possion distribution of ChIP-seq
ChIP-Seq
7.0 years ago by Ben ▴ 60
0
votes
1
reply
3.6k
views
Comment: A: peak calling of ChIP-seq
7.0 years ago by Ben ▴ 60
0
votes
1
reply
5.5k
views
Comment: A: Machine Learning - RNAseq
7.1 years ago by Ben ▴ 60
0
votes
0
replies
1.5k
views
Answer: A: Cancer data for histone Chip-seq in human and mouse
7.1 years ago by Ben ▴ 60
0
votes
1
reply
14k
views
Comment: A: retrieve full TCGA datasets from cBioportal with R
7.1 years ago by Ben ▴ 60
0
votes
0
replies
1.2k
views
analyze ChIP-chip data
alignment
updated 7.1 years ago by 141k • written 7.1 years ago by ▴ 60
0
votes
1
reply
3.0k
views
Comment: C: How do I select top 100,000 non-overlapping peaks from MACS2 narrow peaks output
7.1 years ago by Ben ▴ 60
0
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1
reply
4.5k
views
Answer: A: Very high GC content in RNA-seq
7.1 years ago by Ben ▴ 60
46 results • Page 1 of 1
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