User: jordidebruin

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Posts by jordidebruin

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How to calculate log scores from an alignment?
... Hi, I'm making a practice exam. I have the question, and the correct answer, but I don't know the calculation. Could someone help me with this? I have 6 sequences: Seq1 CACCGGATGA Seq2 CGCCGGATGG Seq3 CGAAAGGTCG Seq4 CGTAGCATCG Seq5 GCTATCATCA Seq6 GCTAGCATCA The q ...
log matrix alignment scores written 23 months ago by jordidebruin0 • updated 23 months ago by a.zielezinski8.6k
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Comment: C: How to calculate the Position Weight Matrix score?
... Thank you very much!! Now I understand it. ...
written 23 months ago by jordidebruin0
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How to calculate the Position Weight Matrix score?
... Hi, Can anyone explain me how to calculate the Position Weight Matrix score? I know the formula, but I don't understand it. I have a table with the frequences of nucleotides, and a table with the PWM scores: Frequences of nucleotides: Position: 1 2 3 4 ...
bioinformatics pwm pssm score written 23 months ago by jordidebruin0 • updated 15 months ago by yjjjng09010

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