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Comment:
Comment: Gold standard for bulk RNA-seq downsampling - number of uniquely mapped reads
2.9 years ago by
msimmer92
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Comment:
Comment: Gold standard for bulk RNA-seq downsampling - number of uniquely mapped reads
2.9 years ago by
msimmer92
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Comment:
Comment: How to filter out a list of specific genes from the DESeq object in R - bulk RNA
3.0 years ago by
msimmer92
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Comment:
C: Generalizing snakemake MACS2 code - WildcardError Wildcards in input files canno
4.0 years ago by
msimmer92
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3.8k
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Comment:
C: Snakemake SyntaxError: No rule keywords allowed after run/shell/script/wrapper/c
4.1 years ago by
msimmer92
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8.9k
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Comment:
C: If we use MACS2 do we need to remove duplicate sequences with samtools rmdup ?
4.3 years ago by
msimmer92
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1.7k
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Comment:
C: Heterogeneity from bulk ChIP-seq or ATAC-seq data
4.4 years ago by
msimmer92
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9.2k
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Comment:
C: DiffBind: Error in `.rowNamesDF<-`(x, value = value) : invalid 'row.names' lengt
4.4 years ago by
msimmer92
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2.8k
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Comment:
C: Downsampling single-end human ChIP-seq data
4.8 years ago by
msimmer92
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3.4k
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Comment:
C: Get all gene symbol in kegg pathway with clusterProfiler
4.8 years ago by
msimmer92
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2.8k
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Comment:
C: Downsampling single-end human ChIP-seq data
4.8 years ago by
msimmer92
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2.8k
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Comment:
C: Downsampling single-end human ChIP-seq data
4.8 years ago by
msimmer92
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2.5k
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Comment:
C: How to properly organize a DiffBind analysis to normalize data across conditions
4.9 years ago by
msimmer92
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2.5k
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Comment:
C: How to properly organize a DiffBind analysis to normalize data across conditions
4.9 years ago by
msimmer92
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2.5k
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Comment:
C: How to properly organize a DiffBind analysis to normalize data across conditions
4.9 years ago by
msimmer92
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9.2k
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Comment:
C: DiffBind: Error in `.rowNamesDF<-`(x, value = value) : invalid 'row.names' lengt
4.9 years ago by
msimmer92
▴ 300
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1
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9.2k
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Comment:
C: DiffBind: Error in `.rowNamesDF<-`(x, value = value) : invalid 'row.names' lengt
4.9 years ago by
msimmer92
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5.8k
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Comment:
C: How to compare bigwig tracks of two ATAC libraries.
5.0 years ago by
msimmer92
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Comment:
C: Converstion of BED with scores into bigWig
5.0 years ago by
msimmer92
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31k
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Comment:
C: Converstion of BED with scores into bigWig
5.0 years ago by
msimmer92
▴ 300
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31k
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Comment:
C: Converstion of BED with scores into bigWig
5.0 years ago by
msimmer92
▴ 300
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31k
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Comment:
C: Converstion of BED with scores into bigWig
5.0 years ago by
msimmer92
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2.1k
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Comment:
C: How to zoom out to whole genome view in UCSC browser?
5.0 years ago by
msimmer92
▴ 300
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Comment:
C: Is My Bam File Sorted ?
5.0 years ago by
msimmer92
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2.1k
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Comment:
C: How to zoom out to whole genome view in UCSC browser?
5.1 years ago by
msimmer92
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2.8k
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Comment:
C: Can bedtools subtract support multiple files?
5.1 years ago by
msimmer92
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11k
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Comment:
C: how to add bed files together
5.1 years ago by
msimmer92
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11k
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Comment:
C: how to add bed files together
5.1 years ago by
msimmer92
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11k
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Comment:
C: how to add bed files together
5.1 years ago by
msimmer92
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28k
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Comment:
C: What is the difference between narrow peak, Broad peak and a gapped peak of a c
5.1 years ago by
msimmer92
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1
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9.2k
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Comment:
C: DiffBind: Error in `.rowNamesDF<-`(x, value = value) : invalid 'row.names' lengt
5.1 years ago by
msimmer92
▴ 300
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6.5k
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Comment:
C: MACS2 for K27me3 peak calling
5.1 years ago by
msimmer92
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2.7k
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Comment:
C: How to correlate chip seq peaks?
5.2 years ago by
msimmer92
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1
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3.6k
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Comment:
C: Unexpected hump in GC content distribution from FasQC report in ChIP-seq
5.2 years ago by
msimmer92
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1
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3.6k
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Comment:
C: Unexpected hump in GC content distribution from FasQC report in ChIP-seq
5.2 years ago by
msimmer92
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3.6k
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Comment:
C: Unexpected hump in GC content distribution from FasQC report in ChIP-seq
5.2 years ago by
msimmer92
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3.6k
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Comment:
C: Unexpected hump in GC content distribution from FasQC report in ChIP-seq
5.2 years ago by
msimmer92
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11k
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Comment:
C: Bimodal GC content
5.2 years ago by
msimmer92
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12k
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Comment:
C: Fastqc Html Report To Pdf (With A Script)
5.2 years ago by
msimmer92
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12k
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Comment:
C: Fastqc Html Report To Pdf (With A Script)
5.2 years ago by
msimmer92
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1
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7.9k
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Comment:
C: Interpretation of Trimmomatic Results after Paired-End Adapter Trimming
5.2 years ago by
msimmer92
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5.2k
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Comment:
C: removal of spesific read from fastq file
5.2 years ago by
msimmer92
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3.2k
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Comment:
C: Why does this plot of human GC-content have a peak at around 60%
5.2 years ago by
msimmer92
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1
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2.3k
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Comment:
C: GC content in DNA sequnce
5.2 years ago by
msimmer92
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23k
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Comment:
C: Where to download blacklisted regions?
5.2 years ago by
msimmer92
▴ 300
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2.0k
views
Comment:
C: The 2013 Eisenberg and Levanon housekeeping genes list for Human is the most upd
5.2 years ago by
msimmer92
▴ 300
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votes
1
reply
2.0k
views
Comment:
C: The 2013 Eisenberg and Levanon housekeeping genes list for Human is the most upd
5.2 years ago by
msimmer92
▴ 300
0
votes
1
reply
2.0k
views
Comment:
C: The 2013 Eisenberg and Levanon housekeeping genes list for Human is the most upd
5.2 years ago by
msimmer92
▴ 300
0
votes
1
reply
2.0k
views
Comment:
C: Housekeeping genes list for Human
5.2 years ago by
msimmer92
▴ 300
1
vote
0
replies
2.0k
views
Comment:
C: Housekeeping genes list for Human
5.2 years ago by
msimmer92
▴ 300
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