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0
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2
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203
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How do you get functional/biological role of motifs?
JASPAR
updated 4 days ago by 2.8k • written 5 days ago by ▴ 240
0
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1
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303
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Comment: Comment: How to get names and class information from a list of target IDs from the JASPAR
6 days ago by DNAngel ▴ 240
0
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1
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303
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Comment: Comment: How to get names and class information from a list of target IDs from the JASPAR
6 days ago by DNAngel ▴ 240
0
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2
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303
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Comment: Comment: How to get names and class information from a list of target IDs from the JASPAR
6 days ago by DNAngel ▴ 240
2
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8
replies
303
views
How to get names and class information from a list of target IDs from the JASPAR database?
JASPAR
updated 6 days ago by 68k • written 6 days ago by ▴ 240
0
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0
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360
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Comment: Comment: Program to detect cis-regulatory modules for a non model species?
10 weeks ago by DNAngel ▴ 240
0
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0
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360
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Comment: Comment: Program to detect cis-regulatory modules for a non model species?
10 weeks ago by DNAngel ▴ 240
3
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3
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360
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Program to detect cis-regulatory modules for a non model species?
factors transcription
10 weeks ago by DNAngel ▴ 240
0
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1
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368
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Comment: Comment: How do you find transcription factors in a newly sequenced genome?
3 months ago by DNAngel ▴ 240
4
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3
replies
368
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How do you find transcription factors in a newly sequenced genome?
interproscan factors transcription
updated 3 months ago by ▴ 20 • written 3 months ago by ▴ 240
1
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1
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408
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Comment: Comment: How do you obtain a list of transcription factors from a genome?
3 months ago by DNAngel ▴ 240
0
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1
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408
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Comment: Comment: How do you obtain a list of transcription factors from a genome?
3 months ago by DNAngel ▴ 240
0
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0
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408
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Comment: Comment: How do you obtain a list of transcription factors from a genome?
3 months ago by DNAngel ▴ 240
0
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1
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408
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Comment: Comment: How do you obtain a list of transcription factors from a genome?
3 months ago by DNAngel ▴ 240
7
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8
replies
408
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How do you obtain a list of transcription factors from a genome?
question
updated 3 months ago by ▴ 220 • written 3 months ago by ▴ 240
0
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6
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404
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Confused about which database to use - nt or nr?
blast
updated 4 months ago by 11k • written 4 months ago by ▴ 240
0
votes
2
replies
367
views
What happened to the SparCC github repository?
sparcc
updated 9 months ago by ★ 1.5k • written 9 months ago by ▴ 240
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0
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4.0k
views
Comment: Comment: WGCNA exportNetworkToCytoscape issue!!
12 months ago by DNAngel ▴ 240
2
votes
8
replies
2.1k
views
Why does Kraken2 not produce taxon percentages with --report flag?
kraken2
updated 13 months ago by ▴ 80 • written 21 months ago by ▴ 240
0
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0
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407
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Can I use DESeq2 to analyze my abundance dataset, which also happens to have a lot of zeros?
deseq2
16 months ago by DNAngel ▴ 240
0
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0
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1.3k
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Comment: Comment: Is there really a difference in blastn -task blastn and -task megablast when dea
16 months ago by DNAngel ▴ 240
0
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1
reply
1.3k
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Comment: Comment: Is there really a difference in blastn -task blastn and -task megablast when dea
16 months ago by DNAngel ▴ 240
0
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4
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1.3k
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Forum: Is there really a difference in blastn -task blastn and -task megablast when dealing with unmapped reads?
blastn
16 months ago by DNAngel ▴ 240
0
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0
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870
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Comment: Comment: WGCNA, what does it mean if no hub genes are identified?
16 months ago by DNAngel ▴ 240
0
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1
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870
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Comment: Comment: WGCNA, what does it mean if no hub genes are identified?
16 months ago by DNAngel ▴ 240
2
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4
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870
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WGCNA, what does it mean if no hub genes are identified?
WGCNA
16 months ago by DNAngel ▴ 240
1
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0
replies
369
views
R package for determining best model transformation for a dataset?
R
17 months ago by DNAngel ▴ 240
0
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1
reply
1.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
17 months ago by DNAngel ▴ 240
0
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0
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1.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
17 months ago by DNAngel ▴ 240
0
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1
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1.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
17 months ago by DNAngel ▴ 240
0
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2
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1.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
17 months ago by DNAngel ▴ 240
0
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0
replies
1.5k
views
Comment: Comment: Output of samtools view, what does the third column actually represent?
17 months ago by DNAngel ▴ 240
11
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15
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1.5k
views
Output of samtools view, what does the third column actually represent?
samtools
updated 17 months ago by 16k • written 17 months ago by ▴ 240
0
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2
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1.5k
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Comment: Comment: Output of samtools view, what does the third column actually represent?
17 months ago by DNAngel ▴ 240
0
votes
0
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357
views
How to find out how many reads were used in contig assembly in metaSPADES?
metaspades
17 months ago by DNAngel ▴ 240
1
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1
reply
571
views
How do you interpret Tukey's significance when there is no group clustering alone?
Tukey
17 months ago by DNAngel ▴ 240
0
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0
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571
views
Answer: Answer: How do you interpret Tukey's significance when there is no group clustering alon
17 months ago by DNAngel ▴ 240
1
vote
1
reply
689
views
What is the difference between using -max_target_seqs 1 -max_hsps 1 versus just the defaults and then filtering for top hit?
blast
updated 17 months ago by 125k • written 17 months ago by ▴ 240
0
votes
0
replies
304
views
R vegdist does not compute distances for all my sites
vegan vegdist R
updated 17 months ago by 37k • written 17 months ago by ▴ 240
2
votes
1
reply
1.0k
views
What is the recommended contig length to filter?
metaspades
updated 18 months ago by ★ 22k • written 18 months ago by ▴ 240
0
votes
0
replies
670
views
Comment: Comment: Is there a different names.dmp file in the taxonomy name/id browser?
18 months ago by DNAngel ▴ 240
0
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2
replies
670
views
Comment: Comment: Is there a different names.dmp file in the taxonomy name/id browser?
18 months ago by DNAngel ▴ 240
0
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1
reply
670
views
Comment: Comment: Is there a different names.dmp file in the taxonomy name/id browser?
18 months ago by DNAngel ▴ 240
2
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6
replies
670
views
Is there a different names.dmp file in the taxonomy name/id browser?
ncbi
updated 18 months ago by 125k • written 18 months ago by ▴ 240
0
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0
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1.4k
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Comment: Comment: Diamond results non-specific compared to NCBI Web
19 months ago by DNAngel ▴ 240
0
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0
replies
1.1k
views
Comment: Comment: Blast 2.11 not blasting all sequences in a file?
19 months ago by DNAngel ▴ 240
0
votes
0
replies
1.1k
views
Comment: Comment: Blast 2.11 not blasting all sequences in a file?
19 months ago by DNAngel ▴ 240
0
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2
replies
1.1k
views
Comment: Comment: Blast 2.11 not blasting all sequences in a file?
19 months ago by DNAngel ▴ 240
1
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11
replies
1.1k
views
Blast 2.11 not blasting all sequences in a file?
blast
19 months ago by DNAngel ▴ 240
0
votes
1
reply
1.1k
views
Comment: Comment: Blast 2.11 not blasting all sequences in a file?
19 months ago by DNAngel ▴ 240
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