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Comment: Comment: Blast 2.11 not blasting all sequences in a file?
19 months ago by DNAngel ▴ 240
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1
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963
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Comment: Comment: Why do I lose sequences when converting my bam files into fastq?
20 months ago by DNAngel ▴ 240
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0
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963
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Comment: Comment: Why do I lose sequences when converting my bam files into fastq?
20 months ago by DNAngel ▴ 240
0
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0
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963
views
Comment: Comment: Why do I lose sequences when converting my bam files into fastq?
20 months ago by DNAngel ▴ 240
0
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0
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963
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Comment: Comment: Why do I lose sequences when converting my bam files into fastq?
20 months ago by DNAngel ▴ 240
0
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0
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963
views
Comment: Comment: Why do I lose sequences when converting my bam files into fastq?
20 months ago by DNAngel ▴ 240
7
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12
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963
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7 follow
Why do I lose sequences when converting my bam files into fastq?
fastq bam bamToFastq
updated 20 months ago by 13k • written 20 months ago by ▴ 240
0
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459
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Confused about sambamba syntax for unmapped and mapped
sambamba
20 months ago by DNAngel ▴ 240
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0
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479
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Comment: Comment: Does spades/metaspades normally having missing nodes?
20 months ago by DNAngel ▴ 240
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2
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479
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Does spades/metaspades normally having missing nodes?
metaspades spades
20 months ago by DNAngel ▴ 240
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0
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733
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Comment: Comment: How to use lapply to extract taxonomic information in my species list?
20 months ago by DNAngel ▴ 240
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0
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398
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Comment: Comment: How to get domain/kingdom name in a table of taxid in R tidyverse?
20 months ago by DNAngel ▴ 240
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1
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733
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Comment: Comment: How to use lapply to extract taxonomic information in my species list?
20 months ago by DNAngel ▴ 240
0
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1
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733
views
Comment: Comment: How to use lapply to extract taxonomic information in my species list?
20 months ago by DNAngel ▴ 240
3
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5
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733
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How to use lapply to extract taxonomic information in my species list?
R
20 months ago by DNAngel ▴ 240
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0
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3.8k
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Comment: Comment: How to get full taxonomy classification using taxize and myTAI
20 months ago by DNAngel ▴ 240
0
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2
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398
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How to get domain/kingdom name in a table of taxid in R tidyverse?
R
20 months ago by DNAngel ▴ 240
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1
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2.0k
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Comment: Comment: kraken2 unclassified output does not work with paired reads?
20 months ago by DNAngel ▴ 240
2
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3
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2.0k
views
kraken2 unclassified output does not work with paired reads?
Kraken2
updated 20 months ago by 96k • written 20 months ago by ▴ 240
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0
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1.5k
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Comment: Comment: Bamtools stats and samtools flagstat produce different results and confusing my
20 months ago by DNAngel ▴ 240
1
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1
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826
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Best method to visualize metagenomic data besides krona?
metagenomics krona
updated 20 months ago by 3.1k • written 20 months ago by ▴ 240
0
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1
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1.5k
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Comment: Comment: Bamtools stats and samtools flagstat produce different results and confusing my
20 months ago by DNAngel ▴ 240
0
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1
reply
1.5k
views
Comment: Comment: Bamtools stats and samtools flagstat produce different results and confusing my
21 months ago by DNAngel ▴ 240
3
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6
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1.5k
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Bamtools stats and samtools flagstat produce different results and confusing my sambamba output.
sambamba bamtools samtools
20 months ago by DNAngel ▴ 240
0
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0
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2.1k
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Comment: Comment: Why does Kraken2 not produce taxon percentages with --report flag?
21 months ago by DNAngel ▴ 240
0
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1
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2.1k
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Comment: Comment: Why does Kraken2 not produce taxon percentages with --report flag?
21 months ago by DNAngel ▴ 240
0
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1
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2.1k
views
Comment: Comment: Why does Kraken2 not produce taxon percentages with --report flag?
21 months ago by DNAngel ▴ 240
0
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0
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2.1k
views
Comment: Comment: Why does Kraken2 not produce taxon percentages with --report flag?
21 months ago by DNAngel ▴ 240
1
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1
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2.1k
views
Answer: Answer: Why does Kraken2 not produce taxon percentages with --report flag?
21 months ago by DNAngel ▴ 240
0
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1
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1.4k
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Comment: Comment: What do you do with the data processed after running metaspades/spades?
21 months ago by DNAngel ▴ 240
0
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1
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1.4k
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Comment: Comment: What do you do with the data processed after running metaspades/spades?
21 months ago by DNAngel ▴ 240
0
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0
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1.4k
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Comment: Comment: What do you do with the data processed after running metaspades/spades?
21 months ago by DNAngel ▴ 240
0
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6
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1.4k
views
What do you do with the data processed after running metaspades/spades?
metaspades spades
updated 21 months ago by 3.1k • written 21 months ago by ▴ 240
0
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0
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4.3k
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Comment: C: How do you download the nt database for Kraken2?
24 months ago by DNAngel ▴ 240
0
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0
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4.3k
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Comment: C: How do you download the nt database for Kraken2?
24 months ago by DNAngel ▴ 240
0
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0
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4.3k
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Comment: C: How do you download the nt database for Kraken2?
24 months ago by DNAngel ▴ 240
0
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2
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4.3k
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Comment: C: How do you download the nt database for Kraken2?
24 months ago by DNAngel ▴ 240
0
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0
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567
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Comment: C: What to do with mapped reads after assembly?
2.0 years ago by DNAngel ▴ 240
0
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2
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567
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What to do with mapped reads after assembly?
Assembly annotation
2.0 years ago by DNAngel ▴ 240
0
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0
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787
views
Comment: C: Error when trying to convert BAM file to FASTQ.
2.0 years ago by DNAngel ▴ 240
0
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11
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787
views
Error when trying to convert BAM file to FASTQ.
samtools bedtools
2.0 years ago by DNAngel ▴ 240
0
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1
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787
views
Comment: C: Error when trying to sort unmapped reads in samtools.
2.0 years ago by DNAngel ▴ 240
0
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1
reply
787
views
Comment: C: Error when trying to sort unmapped reads in samtools.
2.0 years ago by DNAngel ▴ 240
0
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1
reply
787
views
Comment: C: Error when trying to sort unmapped reads in samtools.
2.0 years ago by DNAngel ▴ 240
0
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0
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787
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Comment: C: Error when trying to sort unmapped reads in samtools.
2.0 years ago by DNAngel ▴ 240
0
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0
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1.1k
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Comment: C: FastQC Per sequence GC count always fails after trimmomatic?
2.0 years ago by DNAngel ▴ 240
0
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1
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1.1k
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Comment: C: FastQC Per sequence GC count always fails after trimmomatic?
2.0 years ago by DNAngel ▴ 240
0
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6
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1.1k
views
FastQC Per sequence GC count always fails after trimmomatic?
fastqc trimmomatic
updated 2.0 years ago by 125k • written 2.0 years ago by ▴ 240
0
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0
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1.1k
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Comment: C: FastQC Per sequence GC count always fails after trimmomatic?
2.0 years ago by DNAngel ▴ 240
0
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2
replies
4.3k
views
Comment: C: How do you download the nt database for Kraken2?
2.0 years ago by DNAngel ▴ 240
188 results • Page 2 of 4
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