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Comment: Comment: How to get full taxonomy classification using taxize and myTAI
16 months ago by DNAngel ▴ 210
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2
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346
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How to get domain/kingdom name in a table of taxid in R tidyverse?
R
16 months ago by DNAngel ▴ 210
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1.7k
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Comment: Comment: kraken2 unclassified output does not work with paired reads?
16 months ago by DNAngel ▴ 210
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3
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kraken2 unclassified output does not work with paired reads?
Kraken2
updated 16 months ago by 94k • written 16 months ago by ▴ 210
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1.2k
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Comment: Comment: Bamtools stats and samtools flagstat produce different results and confusing my
16 months ago by DNAngel ▴ 210
1
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1
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719
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Best method to visualize metagenomic data besides krona?
metagenomics krona
updated 16 months ago by 2.8k • written 16 months ago by ▴ 210
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1
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1.2k
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Comment: Comment: Bamtools stats and samtools flagstat produce different results and confusing my
16 months ago by DNAngel ▴ 210
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1
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1.2k
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Comment: Comment: Bamtools stats and samtools flagstat produce different results and confusing my
17 months ago by DNAngel ▴ 210
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6
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1.2k
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Bamtools stats and samtools flagstat produce different results and confusing my sambamba output.
sambamba bamtools samtools
16 months ago by DNAngel ▴ 210
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0
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1.8k
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Comment: Comment: Why does Kraken2 not produce taxon percentages with --report flag?
17 months ago by DNAngel ▴ 210
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1.8k
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Comment: Comment: Why does Kraken2 not produce taxon percentages with --report flag?
17 months ago by DNAngel ▴ 210
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1
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1.8k
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Comment: Comment: Why does Kraken2 not produce taxon percentages with --report flag?
17 months ago by DNAngel ▴ 210
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0
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1.8k
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Comment: Comment: Why does Kraken2 not produce taxon percentages with --report flag?
17 months ago by DNAngel ▴ 210
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1
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1.8k
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Answer: Answer: Why does Kraken2 not produce taxon percentages with --report flag?
17 months ago by DNAngel ▴ 210
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1
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1.3k
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Comment: Comment: What do you do with the data processed after running metaspades/spades?
17 months ago by DNAngel ▴ 210
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1
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1.3k
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Comment: Comment: What do you do with the data processed after running metaspades/spades?
17 months ago by DNAngel ▴ 210
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1.3k
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Comment: Comment: What do you do with the data processed after running metaspades/spades?
17 months ago by DNAngel ▴ 210
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6
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1.3k
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What do you do with the data processed after running metaspades/spades?
metaspades spades
updated 17 months ago by 2.8k • written 17 months ago by ▴ 210
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0
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3.7k
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Comment: C: How do you download the nt database for Kraken2?
19 months ago by DNAngel ▴ 210
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0
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3.7k
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Comment: C: How do you download the nt database for Kraken2?
19 months ago by DNAngel ▴ 210
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0
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3.7k
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Comment: C: How do you download the nt database for Kraken2?
19 months ago by DNAngel ▴ 210
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2
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3.7k
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Comment: C: How do you download the nt database for Kraken2?
19 months ago by DNAngel ▴ 210
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0
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482
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Comment: C: What to do with mapped reads after assembly?
20 months ago by DNAngel ▴ 210
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2
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482
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What to do with mapped reads after assembly?
Assembly annotation
20 months ago by DNAngel ▴ 210
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0
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661
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Comment: C: Error when trying to convert BAM file to FASTQ.
20 months ago by DNAngel ▴ 210
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11
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661
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Error when trying to convert BAM file to FASTQ.
samtools bedtools
20 months ago by DNAngel ▴ 210
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1
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661
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Comment: C: Error when trying to sort unmapped reads in samtools.
20 months ago by DNAngel ▴ 210
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1
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661
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Comment: C: Error when trying to sort unmapped reads in samtools.
20 months ago by DNAngel ▴ 210
0
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1
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661
views
Comment: C: Error when trying to sort unmapped reads in samtools.
20 months ago by DNAngel ▴ 210
0
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0
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661
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Comment: C: Error when trying to sort unmapped reads in samtools.
20 months ago by DNAngel ▴ 210
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0
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1.0k
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Comment: C: FastQC Per sequence GC count always fails after trimmomatic?
20 months ago by DNAngel ▴ 210
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1
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1.0k
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Comment: C: FastQC Per sequence GC count always fails after trimmomatic?
20 months ago by DNAngel ▴ 210
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6
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1.0k
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FastQC Per sequence GC count always fails after trimmomatic?
fastqc trimmomatic
updated 20 months ago by 121k • written 20 months ago by ▴ 210
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0
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1.0k
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Comment: C: FastQC Per sequence GC count always fails after trimmomatic?
20 months ago by DNAngel ▴ 210
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2
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3.7k
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Comment: C: How do you download the nt database for Kraken2?
20 months ago by DNAngel ▴ 210
2
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13
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3.7k
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How do you download the nt database for Kraken2?
Kraken2 nt
updated 20 months ago by 121k • written 20 months ago by ▴ 210
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0
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520
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Comment: C: Papers/posts on best practises for dealing with Illumina reads?
20 months ago by DNAngel ▴ 210
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0
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520
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Comment: C: Papers/posts on best practises for dealing with Illumina reads?
20 months ago by DNAngel ▴ 210
0
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1
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520
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Comment: C: Papers/posts on best practises for dealing with Illumina reads?
20 months ago by DNAngel ▴ 210
0
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6
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520
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Papers/posts on best practises for dealing with Illumina reads?
assembly trimmomatic bwa-mem
updated 20 months ago by 65k • written 20 months ago by ▴ 210
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0
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400
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Comment: C: Determining if the number of significant results between two categories is signi
23 months ago by DNAngel ▴ 210
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2
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400
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Determining if the number of significant results between two categories is significantly different?
statistics
23 months ago by DNAngel ▴ 210
0
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0
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326
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How to know if it is missing a gene or assembly error?
BWA Bioinformatics Assembly
23 months ago by DNAngel ▴ 210
0
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0
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387
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PAML sample size question and variation in results
PAML
23 months ago by DNAngel ▴ 210
0
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0
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724
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Understanding PAML results between random-sites and clade model C.
PAML
2.0 years ago by DNAngel ▴ 210
2
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3
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1.2k
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How to parallelize bwa mem for single-end data within a larger bash script?
bash bwa-mem gnu-parallel
updated 2.9 years ago by 149k • written 2.9 years ago by ▴ 210
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0
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4.8k
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Comment: C: Optimize bwa mem in parallel on a SLURM cluster
2.9 years ago by DNAngel ▴ 210
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0
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1.2k
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Comment: C: How to parallelize bwa mem for single-end data within a larger bash script?
2.9 years ago by DNAngel ▴ 210
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0
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1.2k
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Comment: C: How do you extract longest transcript from fasta file using length and header ID
3.0 years ago by DNAngel ▴ 210
2
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2
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1.2k
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How do you extract longest transcript from fasta file using length and header IDs?
awk fasta
updated 3.0 years ago by 13k • written 3.0 years ago by ▴ 210
173 results • Page 2 of 4
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