User: shafnaasmy.v.s

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Posts by shafnaasmy.v.s

<prev • 14 results • page 1 of 2 • next >
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Comment: C: Lnc RNA,RNA Seq
... hi thank you for helping me out.i am working on already available RNA seq data from SRA. So how do i find its a ribo-depleted RNA seq. ...
written 25 days ago by shafnaasmy.v.s10
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Lnc RNA,RNA Seq
... Hi i have got a set of deferentially expressed Long non coding RNA from a RNA seq dataset. what are the further analysis i can do with them.? Please help ...
next-gen rna-seq sequencing written 25 days ago by shafnaasmy.v.s10 • updated 25 days ago by vchris_ngs4.2k
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Lnc RNA,RNA Seq
... hi I have a RNA seq data and planning to do LNC rna analysis. LNC Rna analysis can be done only on small RNA seq or can be done using Rna seq data? ...
rna-seq lncrna written 8 weeks ago by shafnaasmy.v.s10 • updated 8 weeks ago by Devon Ryan74k
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3D structure for proteins
... hi i have a set of protein names.i want to now if they have structure or not..the list is very long so i want to submit it in one go and find out. can anyone help me out ...
pdb 3d protein structure gene list written 9 weeks ago by shafnaasmy.v.s10 • updated 8 weeks ago by yamule120
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miRNA identification from RNA seq data
... HI i am working on RNA seq data and not small RNA data.. i want to know how to finf the miRNA from RNA seq data. thanks in advance plz help ...
sequencing next-gen rna-seq mirna written 4 months ago by shafnaasmy.v.s10 • updated 4 months ago by Buffo590
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Comment: C: cufflinks error on ubuntu 16.04
... hi command used was sudo apt-get install cufflinks error Reading package lists... Done Building dependency tree Reading state information... Done Package cufflinks is not available, but is referred to by another package. This may mean that the package is missing, has been obsoleted, or is only a ...
written 7 months ago by shafnaasmy.v.s10
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cufflinks error on ubuntu 16.04
... hi I am working in ubuntu 16.04 i wanted to install cufflinks 2.2.1 but i get error saying Reading package lists... Done Building dependency tree Reading state information... Done Package cufflinks is not available, but is referred to by another package. This may mean that the package is ...
next-gen rna-seq written 7 months ago by shafnaasmy.v.s10
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cufflinks results is all zeros...??
... hi i used bowtie -->samtools 0.1--->cufflinks i did cufflinks for each dataset and i got all the four files as a result but the resulting **gene.fpkm.tracking** file looks like this tracking_id class_code nearest_ref_id gene_id gene_short_name tss_id locus length coverage FPKM FPKM_conf_ ...
next-gen cufflinks rna-seq written 7 months ago by shafnaasmy.v.s10
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Comment: C: samtools updation in linux
... will try it ...and will be back ...
written 7 months ago by shafnaasmy.v.s10
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Comment: C: samtools updation in linux
... thank u and ill try it and get back ...
written 7 months ago by shafnaasmy.v.s10

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