User: sey
sey • 10
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Posts by sey
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... I have multiple metastatic samples from the same cancer patient. I have used FACETS to call CNVs for each sample. Now, I would like to merge the individual results in a table where each row is a CNV, and each column is a sample.
Because different samples have different segments, I merge the sample ...
written 14 months ago by
sey • 10
• updated
14 months ago by
markus.riester • 270
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... I use Mutect to find somatic mutations in multiple tumor samples (to be used in clonality analysis). I don't get the readcounts if the caller did not identify a somatic mutation in a sample.
I'm using bam-readcount to fill in the empty values after merging Mutect results from different samples. Wher ...
written 18 months ago by
sey • 10
• updated
18 months ago by
Chris Miller ♦ 20k
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