User: Abdel

gravatar for Abdel
Abdel20
Reputation:
20
Status:
New User
Location:
France/Paris
Last seen:
11 hours ago
Joined:
1 year, 8 months ago
Email:
a***************@gmail.com

Posts by Abdel

<prev • 5 results • page 1 of 1 • next >
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Comment: C: Create multiple files using awk
... Thank all for helping, and for advices. ...
written 2 days ago by Abdel20
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Comment: C: Create multiple files using awk
... Thanks for reply. I am a biologist and beginer in unix and data analysis :). I asked the question to reduce the time of searching in pdf courses. Abdel ...
written 5 days ago by Abdel20
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(Closed) Create multiple files using awk
... Hi, all I use awk to extract rows from a text file: awk 'NR==FNR{vals[$1];next} ($1) in vals' indiv.txt file1.txt > new_file1.txt But how can I use the same code for multiple files ? I can use : awk 'NR==FNR{vals[$1];next} ($1) in vals' indiv.txt file1.txt > new_file1.txt awk ...
grep awk sed bash written 5 days ago by Abdel20 • updated 5 days ago by finswimmer8.8k
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Comment: A: Genome-wide LD PLINK | empty file for chromosome 24
... Yes *Bos taurus*. `--chr-set `is required only for chromosome 27, 28 and 29. My only probleme is with chromosome 24. I am working on bfiles (the same thing if I work with ped and map files). ...
written 8 days ago by Abdel20
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Genome-wide LD PLINK | empty file for chromosome 24
... Hi everyone, I am working with genome wide data (SNPs) using plink and want to compute pairwize LD (r²) between SNPs for each chromosome (29 chromosomes). This is an example of script I used: plink --bfile myData1 --r2 --ld-window-r2 0 --out chr1 plink --bfile myData2 --r2 --ld-windo ...
genome ld plink snp written 8 days ago by Abdel20

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