User: cerulean

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cerulean0
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Posts by cerulean

<prev • 7 results • page 1 of 1 • next >
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Comment: C: Rename FASTA files according to FASTA file header
... The full header name as the filename with underscore as separator will be ideal. ...
written 18 months ago by cerulean0
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Comment: C: Rename FASTA files according to FASTA file header
... Thank you so much!!! ...
written 18 months ago by cerulean0
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Comment: C: Rename FASTA files according to FASTA file header
... Thanks, this really did it! Is there an online compendium or some collection of such useful commands using awk, sed, grep etc that will help me become a better bioinformatician? I can of course Google! But any specific suggestion/advice will expedite my search! ...
written 18 months ago by cerulean0
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Comment: C: Rename FASTA files according to FASTA file header
... This provides the perfect output! Thanks! I was able to set the special character as '/'. ...
written 18 months ago by cerulean0
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Comment: C: Rename FASTA files according to FASTA file header
... > AAA64362/A/Japan/305+/1957 > AAA64363/A/RI/5-/1957 > AAA64364/A/Japan/305-/1957 ...and so on ...
written 18 months ago by cerulean0
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Rename FASTA files according to FASTA file header
... In a typical FASTA file, how can the header be used as its filename (i.e., replace the current file name with header ID) ? I have multiple such FASTA files. I have been scouring the internet to find a simple script that I can use in LINUX to obtain the output, but to no avail. I am not well-versed ...
sequence written 18 months ago by cerulean0 • updated 18 months ago by Matt Shirley9.1k
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Significance of pathways
... I have just been assigned to a project that is in the Bioinformatics field which is novel for me and it involves the following: There is a list of genes. These genes have been associated with pathways derived from the KEGG database. I also have the KEGG genes and their associated pathways. I have t ...
gene written 2.1 years ago by cerulean0

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