User: ES.67

gravatar for ES.67
ES.6720
Reputation:
20
Status:
New User
Location:
Last seen:
2 weeks, 3 days ago
Joined:
3 years, 2 months ago
Email:
e************@gmail.com

Posts by ES.67

<prev • 5 results • page 1 of 1 • next >
0
votes
2
answers
232
views
2
answers
Answer: A: DEG Analysis in R
... does this help ? https://www.biostars.org/p/412739/ ...
written 19 days ago by ES.6720
0
votes
0
answers
117
views
0
answers
How to Identify set of associated SNPs with single SNP using 1001 genomes
... Dear all, In the check up of aligned sequences from 1000 Arabidopsis GP for a gene of interest, one particular SNP was found in a subset of population (about 5%). While there are other SNPs too in this gene within 1000 genomes population (at different densities), 1. How can I identify more SNP ...
gene R snp genomics wgs written 19 days ago by ES.6720
0
votes
1
answer
982
views
1
answers
Comment: C: Fold change cut off enrichment analysis
... Arbitrary cut-offs can be misleading, therefore one also needs joined neighboring intervals in such a case to cover the maximum range of values (low to high expression) and then perform enrichment analysis. In my opinion, binning by Log2FC values certainly adds more relevance to the whole analysis b ...
written 16 months ago by ES.6720
0
votes
0
answers
1.1k
views
0
answers
Comment: C: Bioconductor Graphite package : Cannot retrive pathways
... I am using version 1.22.0. ...
written 3.1 years ago by ES.6720
3
votes
0
answers
1.1k
views
0
answers
Bioconductor Graphite package : Cannot retrive pathways
... Hello everyone I am trying to use this package [graphite][1] for pathway analysis from gene expression data of Rice( Oryza sativa) . However, I cannot retrieve the pathways from kegg using this package. I am using this code `osa <- pathways("Oryza sativa" , "kegg")` Firstly can it be used for ...
R bioconductor pathways written 3.1 years ago by ES.6720

Latest awards to ES.67

Popular Question 3 months ago, created a question with more than 1,000 views. For Bioconductor Graphite package : Cannot retrive pathways

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1348 users visited in the last hour