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Answer: Answer: Problem with Newick format - ggtree in R
7 months ago by cfos4698 ★ 1.1k
2
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0
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823
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Answer: Answer: snippy error
7 months ago by cfos4698 ★ 1.1k
0
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0
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828
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Comment: Comment: RNA seq for non-model species
7 months ago by cfos4698 ★ 1.1k
2
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0
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1.2k
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Comment: Comment: Why is local BLAST so slow? (yet another one of these questions)
7 months ago by cfos4698 ★ 1.1k
0
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1
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828
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Comment: Comment: RNA seq for non-model species
7 months ago by cfos4698 ★ 1.1k
2
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2
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828
views
Answer: Answer: RNA seq for non-model species
7 months ago by cfos4698 ★ 1.1k
1
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1
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1.2k
views
Answer: Answer: Trimming nanopore reads
7 months ago by cfos4698 ★ 1.1k
0
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0
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4.4k
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Comment: Comment: Should I use the basecaller Dorado to analyze my Nanopore Data?
8 months ago by cfos4698 ★ 1.1k
2
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0
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842
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Answer: Answer: Importing modules based on python in bash script wont work
9 months ago by cfos4698 ★ 1.1k
0
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0
replies
594
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Comment: Comment: Alternative to Gentrome?
9 months ago by cfos4698 ★ 1.1k
0
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1
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489
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Answer: Answer: What is the best way to identify which group of genes is more highly expressed?
10 months ago by cfos4698 ★ 1.1k
3
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1
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1.6k
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Comment: Comment: UMAP or TSNE for single cells?
10 months ago by cfos4698 ★ 1.1k
1
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0
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667
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Answer: Answer: Kaiju database download
10 months ago by cfos4698 ★ 1.1k
0
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0
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617
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Answer: Answer: Comparative transcriptomics between species
10 months ago by cfos4698 ★ 1.1k
2
votes
0
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7.9k
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Answer: Answer: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
11 months ago by cfos4698 ★ 1.1k
1
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1
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2.1k
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Comment: Comment: Automate the Splitting of a VCF File by Sample (bcftools)
11 months ago by cfos4698 ★ 1.1k
1
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0
replies
1.1k
views
Answer: Answer: What is the fastest nucleotide sequence alignment search tool for 100mer queries
12 months ago by cfos4698 ★ 1.1k
0
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0
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653
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Answer: Answer: Can vg stats -a be used on a bam file?
12 months ago by cfos4698 ★ 1.1k
1
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1
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1.1k
views
Answer: Answer: Found some plasmids in my sequence. IS there any tool or process by which i can
12 months ago by cfos4698 ★ 1.1k
0
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1
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1.7k
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Comment: Comment: Converting string to numerical in bcftools
12 months ago by cfos4698 ★ 1.1k
0
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0
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1.9k
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Comment: Comment: WGCNA Analysis - blockwiseModules data processing
13 months ago by cfos4698 ★ 1.1k
0
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1
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3.1k
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Comment: Comment: Cannot process all the reads in a fast5 file?
13 months ago by cfos4698 ★ 1.1k
0
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1
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1.1k
views
Answer: Answer: Align raw Nanopore reads (amplicon, long PCR)
13 months ago by cfos4698 ★ 1.1k
1
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0
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742
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Answer: Answer: Can you convert ASCII text to fastq?
13 months ago by cfos4698 ★ 1.1k
0
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0
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467
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Answer: Answer: Measuring Evolutionary Distance Between Species from Chronogram
14 months ago by cfos4698 ★ 1.1k
0
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1
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1.0k
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Answer: Answer: Extract Divergence Times and Corresponding Node Numbers from a Time Tree
14 months ago by cfos4698 ★ 1.1k
1
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1
reply
1.6k
views
Clarification for bcftools consensus
bcftools vcf
14 months ago by cfos4698 ★ 1.1k
1
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0
replies
1.6k
views
Answer: Answer: Clarification for bcftools consensus
14 months ago by cfos4698 ★ 1.1k
2
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1
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706
views
Answer: Answer: Phylogenetic tree visualization
14 months ago by cfos4698 ★ 1.1k
0
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1
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1.7k
views
Comment: Comment: Converting string to numerical in bcftools
14 months ago by cfos4698 ★ 1.1k
0
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1
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1.7k
views
Answer: Answer: Converting string to numerical in bcftools
14 months ago by cfos4698 ★ 1.1k
0
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1
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38k
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Comment: Comment: Generating consensus sequence from bam file
14 months ago by cfos4698 ★ 1.1k
1
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1
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4.5k
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Answer: Answer: Best tool for trimming and filtering nanopore direct RNA sequencing.
16 months ago by cfos4698 ★ 1.1k
1
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1
reply
2.0k
views
Comment: Comment: Help with error in snpEff command
16 months ago by cfos4698 ★ 1.1k
1
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1
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2.0k
views
Answer: Answer: Help with error in snpEff command
16 months ago by cfos4698 ★ 1.1k
0
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0
replies
2.8k
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Answer: Answer: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore
16 months ago by cfos4698 ★ 1.1k
0
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1
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1.1k
views
Answer: Answer: Help with my fasta filter python scrips
17 months ago by cfos4698 ★ 1.1k
1
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0
replies
3.2k
views
Comment: Comment: bcftools isec output for multiple vcf files interpretations
17 months ago by cfos4698 ★ 1.1k
1
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1
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1.3k
views
Answer: Answer: How can I use bcftools mpileup or an alternative to find ALL variants without an
17 months ago by cfos4698 ★ 1.1k
2
votes
0
replies
3.1k
views
Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
18 months ago by cfos4698 ★ 1.1k
1
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0
replies
2.7k
views
Comment: Comment: Most efficient way to run Diamond against a very very large database (i.e., NCBI
18 months ago by cfos4698 ★ 1.1k
1
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0
replies
1.1k
views
Answer: Answer: Filtering VCF by specific tag in INFO field
18 months ago by cfos4698 ★ 1.1k
0
votes
1
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1.3k
views
Comment: Comment: Can not get bcftools norm to join biallelics into a multiallelic.
18 months ago by cfos4698 ★ 1.1k
3
votes
3
replies
958
views
Filtering of tricky overlapping sites in VCF
vcf bcftools
18 months ago by cfos4698 ★ 1.1k
0
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0
replies
958
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Answer: Answer: Filtering of tricky overlapping sites in VCF
18 months ago by cfos4698 ★ 1.1k
0
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0
replies
958
views
Comment: Comment: Filtering of tricky overlapping sites in VCF
18 months ago by cfos4698 ★ 1.1k
6
votes
0
replies
1.1k
views
Answer: Answer: How to extract FASTA headers in R
18 months ago by cfos4698 ★ 1.1k
2
votes
1
reply
4.8k
views
Comment: Comment: Conda is installing older version of Spades even though latest version is there
19 months ago by cfos4698 ★ 1.1k
0
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1
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6.4k
views
Comment: Comment: conda create env using .yml file leads to dependency conflicts
19 months ago by cfos4698 ★ 1.1k
0
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0
replies
6.4k
views
Comment: Comment: conda create env using .yml file leads to dependency conflicts
19 months ago by cfos4698 ★ 1.1k
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