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417
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Comment: Comment: PAML output
8 days ago by cfos4698 ★ 1.1k
0
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0
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625
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Comment: Comment: Best way to install R packages on an HPC?
27 days ago by cfos4698 ★ 1.1k
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1
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445
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Answer: Answer: Time scaled tree with IQTree giving off looking branch length
4 weeks ago by cfos4698 ★ 1.1k
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1
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559
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Comment: Comment: Unsure whether or not I overcorrected for batch effect in dataset
6 weeks ago by cfos4698 ★ 1.1k
1
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0
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621
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Answer: Answer: mitochondrial assamply use NOVOplasty
6 weeks ago by cfos4698 ★ 1.1k
3
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1
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857
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Answer: Answer: Cross-species differential gene expression, finding orthologs
8 weeks ago by cfos4698 ★ 1.1k
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0
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588
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Comment: Comment: How to visualize Combat-seq corrected counts
8 weeks ago by cfos4698 ★ 1.1k
1
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0
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1.8k
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Comment: Comment: DESeq2: error in checkFullRank(modelMatrix)
7 months ago by cfos4698 ★ 1.1k
2
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0
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988
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Answer: Answer: samtools command not found in bash script
9 months ago by cfos4698 ★ 1.1k
1
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1
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1.2k
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Answer: Answer: Problem with Newick format - ggtree in R
16 months ago by cfos4698 ★ 1.1k
2
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0
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1.4k
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Answer: Answer: snippy error
17 months ago by cfos4698 ★ 1.1k
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0
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1.5k
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Comment: Comment: RNA seq for non-model species
17 months ago by cfos4698 ★ 1.1k
2
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0
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3.0k
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Comment: Comment: Why is local BLAST so slow? (yet another one of these questions)
17 months ago by cfos4698 ★ 1.1k
0
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1
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1.5k
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Comment: Comment: RNA seq for non-model species
17 months ago by cfos4698 ★ 1.1k
2
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2
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1.5k
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Answer: Answer: RNA seq for non-model species
17 months ago by cfos4698 ★ 1.1k
1
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1
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3.2k
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Answer: Answer: Trimming nanopore reads
17 months ago by cfos4698 ★ 1.1k
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0
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9.1k
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Comment: Comment: Should I use the basecaller Dorado to analyze my Nanopore Data?
18 months ago by cfos4698 ★ 1.1k
2
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0
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1.7k
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Answer: Answer: Importing modules based on python in bash script wont work
19 months ago by cfos4698 ★ 1.1k
0
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0
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985
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Comment: Comment: Alternative to Gentrome?
19 months ago by cfos4698 ★ 1.1k
0
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1
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844
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Answer: Answer: What is the best way to identify which group of genes is more highly expressed?
20 months ago by cfos4698 ★ 1.1k
3
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1
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3.3k
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Comment: Comment: UMAP or TSNE for single cells?
20 months ago by cfos4698 ★ 1.1k
1
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0
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1.2k
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Answer: Answer: Kaiju database download
20 months ago by cfos4698 ★ 1.1k
0
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0
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1.0k
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Answer: Answer: Comparative transcriptomics between species
20 months ago by cfos4698 ★ 1.1k
2
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0
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13k
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Answer: Answer: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
21 months ago by cfos4698 ★ 1.1k
1
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1
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4.1k
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Comment: Comment: Automate the Splitting of a VCF File by Sample (bcftools)
21 months ago by cfos4698 ★ 1.1k
1
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0
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1.5k
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Answer: Answer: What is the fastest nucleotide sequence alignment search tool for 100mer queries
22 months ago by cfos4698 ★ 1.1k
0
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0
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998
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Answer: Answer: Can vg stats -a be used on a bam file?
22 months ago by cfos4698 ★ 1.1k
1
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1
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1.5k
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Answer: Answer: Found some plasmids in my sequence. IS there any tool or process by which i can
22 months ago by cfos4698 ★ 1.1k
0
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1
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2.6k
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Comment: Comment: Converting string to numerical in bcftools
22 months ago by cfos4698 ★ 1.1k
0
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0
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3.7k
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Comment: Comment: WGCNA Analysis - blockwiseModules data processing
23 months ago by cfos4698 ★ 1.1k
0
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1
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4.0k
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Comment: Comment: Cannot process all the reads in a fast5 file?
23 months ago by cfos4698 ★ 1.1k
0
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1
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1.5k
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Answer: Answer: Align raw Nanopore reads (amplicon, long PCR)
23 months ago by cfos4698 ★ 1.1k
1
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0
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1.2k
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Answer: Answer: Can you convert ASCII text to fastq?
23 months ago by cfos4698 ★ 1.1k
0
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0
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773
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Answer: Answer: Measuring Evolutionary Distance Between Species from Chronogram
23 months ago by cfos4698 ★ 1.1k
0
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1
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1.5k
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Answer: Answer: Extract Divergence Times and Corresponding Node Numbers from a Time Tree
23 months ago by cfos4698 ★ 1.1k
1
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1
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2.5k
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Clarification for bcftools consensus
bcftools vcf
24 months ago by cfos4698 ★ 1.1k
1
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0
replies
2.5k
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Answer: Answer: Clarification for bcftools consensus
24 months ago by cfos4698 ★ 1.1k
2
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1
reply
1.1k
views
Answer: Answer: Phylogenetic tree visualization
24 months ago by cfos4698 ★ 1.1k
0
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1
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2.6k
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Comment: Comment: Converting string to numerical in bcftools
24 months ago by cfos4698 ★ 1.1k
0
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1
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2.6k
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Answer: Answer: Converting string to numerical in bcftools
2.0 years ago by cfos4698 ★ 1.1k
0
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1
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44k
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Comment: Comment: Generating consensus sequence from bam file
2.0 years ago by cfos4698 ★ 1.1k
1
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1
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7.1k
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Answer: Answer: Best tool for trimming and filtering nanopore direct RNA sequencing.
2.2 years ago by cfos4698 ★ 1.1k
1
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1
reply
2.9k
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Comment: Comment: Help with error in snpEff command
2.2 years ago by cfos4698 ★ 1.1k
1
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1
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2.9k
views
Answer: Answer: Help with error in snpEff command
2.2 years ago by cfos4698 ★ 1.1k
0
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0
replies
4.2k
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Answer: Answer: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore
2.2 years ago by cfos4698 ★ 1.1k
0
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1
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1.5k
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Answer: Answer: Help with my fasta filter python scrips
2.2 years ago by cfos4698 ★ 1.1k
1
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0
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4.6k
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Comment: Comment: bcftools isec output for multiple vcf files interpretations
2.2 years ago by cfos4698 ★ 1.1k
1
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1
reply
1.9k
views
Answer: Answer: How can I use bcftools mpileup or an alternative to find ALL variants without an
2.3 years ago by cfos4698 ★ 1.1k
2
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0
replies
6.3k
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Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
2.3 years ago by cfos4698 ★ 1.1k
1
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0
replies
3.9k
views
Comment: Comment: Most efficient way to run Diamond against a very very large database (i.e., NCBI
2.3 years ago by cfos4698 ★ 1.1k
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