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Answer: Answer: What is the fastest nucleotide sequence alignment search tool for 100mer queries
19 days ago by cfos4698 ▴ 840
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250
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Answer: Answer: Can vg stats -a be used on a bam file?
4 weeks ago by cfos4698 ▴ 840
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615
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Answer: Answer: Found some plasmids in my sequence. IS there any tool or process by which i can
4 weeks ago by cfos4698 ▴ 840
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627
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Answer: Answer: Align raw Nanopore reads (amplicon, long PCR)
6 weeks ago by cfos4698 ▴ 840
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228
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Answer: Answer: Can you convert ASCII text to fastq?
6 weeks ago by cfos4698 ▴ 840
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211
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Answer: Answer: Measuring Evolutionary Distance Between Species from Chronogram
9 weeks ago by cfos4698 ▴ 840
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349
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Answer: Answer: Extract Divergence Times and Corresponding Node Numbers from a Time Tree
9 weeks ago by cfos4698 ▴ 840
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1.2k
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Answer: Answer: Clarification for bcftools consensus
9 weeks ago by cfos4698 ▴ 840
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274
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Answer: Answer: Phylogenetic tree visualization
9 weeks ago by cfos4698 ▴ 840
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765
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Answer: Answer: Converting string to numerical in bcftools
11 weeks ago by cfos4698 ▴ 840
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1.2k
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Answer: Answer: Best tool for trimming and filtering nanopore direct RNA sequencing.
4 months ago by cfos4698 ▴ 840
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987
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Answer: Answer: Help with error in snpEff command
5 months ago by cfos4698 ▴ 840
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987
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Answer: Answer: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore
5 months ago by cfos4698 ▴ 840
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600
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Answer: Answer: Help with my fasta filter python scrips
5 months ago by cfos4698 ▴ 840
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639
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Answer: Answer: How can I use bcftools mpileup or an alternative to find ALL variants without an
6 months ago by cfos4698 ▴ 840
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1.5k
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Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
6 months ago by cfos4698 ▴ 840
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478
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Answer: Answer: Filtering VCF by specific tag in INFO field
6 months ago by cfos4698 ▴ 840
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549
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Answer: Answer: Filtering of tricky overlapping sites in VCF
6 months ago by cfos4698 ▴ 840
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573
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Answer: Answer: How to extract FASTA headers in R
6 months ago by cfos4698 ▴ 840
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2.8k
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Answer: Answer: conda create env using .yml file leads to dependency conflicts
7 months ago by cfos4698 ▴ 840
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938
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Answer: Answer: Split trio vcf file
7 months ago by cfos4698 ▴ 840
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1.3k
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Answer: Answer: bcftools isec output for multiple vcf files interpretations
7 months ago by cfos4698 ▴ 840
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438
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Answer: Answer: Issues with clusterProfiler and WikiPathways
7 months ago by cfos4698 ▴ 840
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871
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Answer: Answer: command line - how to change name of multiple files at the same time
7 months ago by cfos4698 ▴ 840
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342
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Answer: Answer: Extract species-specific SNPs from VCF files
7 months ago by cfos4698 ▴ 840
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777
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Answer: Answer: Not returning any alleles when using bcftools view -q
16 months ago by cfos4698 ▴ 840
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1.1k
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Answer: Answer: Errors loading in a treefile using ETE3
18 months ago by cfos4698 ▴ 840
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1.1k
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Answer: Answer: How can I trim the primer and mask it with the original primer sequences?
20 months ago by cfos4698 ▴ 840
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573
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Answer: Answer: subset vcf to keep only samples heterozygous or homozygous for the alternate all
20 months ago by cfos4698 ▴ 840
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767
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Answer: Answer: Which is the file containing genome assembly?
20 months ago by cfos4698 ▴ 840
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1.5k
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Answer: Answer: Command-line alternative to Geneious assemble for Sanger sequencing data
21 months ago by cfos4698 ▴ 840
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659
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Answer: Answer: SnpEff does not create htmlStats
22 months ago by cfos4698 ▴ 840
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1.4k
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Answer: Answer: a question about using Enrichr
22 months ago by cfos4698 ▴ 840
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581
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Answer: Answer: help with filtering sequences to make a phylogenetic tree
22 months ago by cfos4698 ▴ 840
2
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885
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Answer: Answer: Spike protein sequences for COVID-19 variants
23 months ago by cfos4698 ▴ 840
3
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1
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2.2k
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Answer: Answer: Bam file depth of coverage and statstics
23 months ago by cfos4698 ▴ 840
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1
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1.4k
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Answer: Answer: GO enrichment analysis with clusterProfiler
23 months ago by cfos4698 ▴ 840
2
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1.6k
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Answer: Answer: Noob: Help writing this shell for salmon quantification?
23 months ago by cfos4698 ▴ 840
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1.6k
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Answer: Answer: kegg IDs to pathways in R
23 months ago by cfos4698 ▴ 840
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1.6k
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Answer: Answer: How to run MLST with multiple fastq files
23 months ago by cfos4698 ▴ 840
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962
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Answer: Answer: Protein Sequences MSA vs. BLASTp
23 months ago by cfos4698 ▴ 840
3
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1.4k
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Answer: Answer: Large Scale SARS CoV 2 multiple Sequence Alignment
24 months ago by cfos4698 ▴ 840
2
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1.1k
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Answer: Answer: How to Append numbers on ALL headers in FASTA (e.g., >gene#1)?
2.2 years ago by cfos4698 ▴ 840
2
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0
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1.3k
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Answer: Answer: convert GenBank formatted sequence file to FASTA format
2.2 years ago by cfos4698 ▴ 840
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583
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Answer: Answer: Divergent species and low mapping rate
2.4 years ago by cfos4698 ▴ 840
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984
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Answer: Answer: Creating numbered gene sets from a list of genes
2.4 years ago by cfos4698 ▴ 840
2
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2.6k
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Answer: Answer: Can anyone share me a good GATK4 workflow
2.4 years ago by cfos4698 ▴ 840
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1.8k
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Answer: A: Example of gene2cat goseq
4.5 years ago by cfos4698 ▴ 840
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1.5k
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Answer: A: Batch correction and DE analysis of miRNA Seq data
4.5 years ago by cfos4698 ▴ 840
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1.8k
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Answer: A: batch effects of RNAseq data from public databases - need to correct or not ?
4.5 years ago by cfos4698 ▴ 840
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