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Answer: Answer: Problem with Newick format - ggtree in R
6 months ago by cfos4698 ★ 1.1k
2
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0
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797
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Answer: Answer: snippy error
7 months ago by cfos4698 ★ 1.1k
2
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2
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808
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Answer: Answer: RNA seq for non-model species
7 months ago by cfos4698 ★ 1.1k
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1.2k
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Answer: Answer: Trimming nanopore reads
7 months ago by cfos4698 ★ 1.1k
2
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0
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820
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Answer: Answer: Importing modules based on python in bash script wont work
8 months ago by cfos4698 ★ 1.1k
0
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1
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481
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Answer: Answer: What is the best way to identify which group of genes is more highly expressed?
9 months ago by cfos4698 ★ 1.1k
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0
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661
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Answer: Answer: Kaiju database download
10 months ago by cfos4698 ★ 1.1k
0
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0
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606
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Answer: Answer: Comparative transcriptomics between species
10 months ago by cfos4698 ★ 1.1k
2
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0
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7.8k
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Answer: Answer: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
11 months ago by cfos4698 ★ 1.1k
1
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0
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1.1k
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Answer: Answer: What is the fastest nucleotide sequence alignment search tool for 100mer queries
12 months ago by cfos4698 ★ 1.1k
0
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0
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650
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Answer: Answer: Can vg stats -a be used on a bam file?
12 months ago by cfos4698 ★ 1.1k
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1
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1.1k
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Answer: Answer: Found some plasmids in my sequence. IS there any tool or process by which i can
12 months ago by cfos4698 ★ 1.1k
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1
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1.1k
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Answer: Answer: Align raw Nanopore reads (amplicon, long PCR)
12 months ago by cfos4698 ★ 1.1k
1
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0
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727
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Answer: Answer: Can you convert ASCII text to fastq?
12 months ago by cfos4698 ★ 1.1k
0
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0
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460
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Answer: Answer: Measuring Evolutionary Distance Between Species from Chronogram
13 months ago by cfos4698 ★ 1.1k
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1
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1.0k
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Answer: Answer: Extract Divergence Times and Corresponding Node Numbers from a Time Tree
13 months ago by cfos4698 ★ 1.1k
1
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0
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1.5k
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Answer: Answer: Clarification for bcftools consensus
13 months ago by cfos4698 ★ 1.1k
2
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1
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697
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Answer: Answer: Phylogenetic tree visualization
13 months ago by cfos4698 ★ 1.1k
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1
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1.7k
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Answer: Answer: Converting string to numerical in bcftools
14 months ago by cfos4698 ★ 1.1k
1
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1
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4.4k
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Answer: Answer: Best tool for trimming and filtering nanopore direct RNA sequencing.
16 months ago by cfos4698 ★ 1.1k
1
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1
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2.0k
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Answer: Answer: Help with error in snpEff command
16 months ago by cfos4698 ★ 1.1k
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0
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2.8k
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Answer: Answer: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore
16 months ago by cfos4698 ★ 1.1k
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1
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1.1k
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Answer: Answer: Help with my fasta filter python scrips
16 months ago by cfos4698 ★ 1.1k
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1
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1.3k
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Answer: Answer: How can I use bcftools mpileup or an alternative to find ALL variants without an
17 months ago by cfos4698 ★ 1.1k
2
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0
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3.1k
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Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
17 months ago by cfos4698 ★ 1.1k
1
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0
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1.0k
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Answer: Answer: Filtering VCF by specific tag in INFO field
18 months ago by cfos4698 ★ 1.1k
0
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0
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949
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Answer: Answer: Filtering of tricky overlapping sites in VCF
18 months ago by cfos4698 ★ 1.1k
6
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0
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1.1k
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Answer: Answer: How to extract FASTA headers in R
18 months ago by cfos4698 ★ 1.1k
1
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2
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6.2k
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Answer: Answer: conda create env using .yml file leads to dependency conflicts
18 months ago by cfos4698 ★ 1.1k
0
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1
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1.5k
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Answer: Answer: Split trio vcf file
18 months ago by cfos4698 ★ 1.1k
4
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1
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3.2k
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Answer: Answer: bcftools isec output for multiple vcf files interpretations
18 months ago by cfos4698 ★ 1.1k
0
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0
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713
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Answer: Answer: Issues with clusterProfiler and WikiPathways
18 months ago by cfos4698 ★ 1.1k
1
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0
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1.4k
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Answer: Answer: command line - how to change name of multiple files at the same time
19 months ago by cfos4698 ★ 1.1k
0
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0
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563
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Answer: Answer: Extract species-specific SNPs from VCF files
19 months ago by cfos4698 ★ 1.1k
0
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1
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1.2k
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Answer: Answer: Not returning any alleles when using bcftools view -q
2.3 years ago by cfos4698 ★ 1.1k
2
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1
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1.7k
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Answer: Answer: Errors loading in a treefile using ETE3
2.5 years ago by cfos4698 ★ 1.1k
0
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0
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1.5k
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Answer: Answer: How can I trim the primer and mask it with the original primer sequences?
2.6 years ago by cfos4698 ★ 1.1k
0
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0
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822
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Answer: Answer: subset vcf to keep only samples heterozygous or homozygous for the alternate all
2.6 years ago by cfos4698 ★ 1.1k
2
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0
replies
1.1k
views
Answer: Answer: Which is the file containing genome assembly?
2.6 years ago by cfos4698 ★ 1.1k
0
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0
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2.1k
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Answer: Answer: Command-line alternative to Geneious assemble for Sanger sequencing data
2.7 years ago by cfos4698 ★ 1.1k
0
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1
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944
views
Answer: Answer: SnpEff does not create htmlStats
2.7 years ago by cfos4698 ★ 1.1k
4
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0
replies
2.1k
views
Answer: Answer: a question about using Enrichr
2.8 years ago by cfos4698 ★ 1.1k
0
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0
replies
818
views
Answer: Answer: help with filtering sequences to make a phylogenetic tree
2.8 years ago by cfos4698 ★ 1.1k
2
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1
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1.2k
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Answer: Answer: Spike protein sequences for COVID-19 variants
2.8 years ago by cfos4698 ★ 1.1k
3
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1
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3.2k
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Answer: Answer: Bam file depth of coverage and statstics
2.8 years ago by cfos4698 ★ 1.1k
1
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1
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1.9k
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Answer: Answer: GO enrichment analysis with clusterProfiler
2.8 years ago by cfos4698 ★ 1.1k
2
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1
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2.2k
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Answer: Answer: Noob: Help writing this shell for salmon quantification?
2.9 years ago by cfos4698 ★ 1.1k
1
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1
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2.4k
views
Answer: Answer: kegg IDs to pathways in R
2.9 years ago by cfos4698 ★ 1.1k
1
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1
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2.1k
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Answer: Answer: How to run MLST with multiple fastq files
2.9 years ago by cfos4698 ★ 1.1k
0
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0
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1.4k
views
Answer: Answer: Protein Sequences MSA vs. BLASTp
2.9 years ago by cfos4698 ★ 1.1k
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