User: deepti1rao

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BSgenome Bioconductor genome assembly

updated 2.6 years ago by josev.die ▴ 60 • written 6.5 years ago by deepti1rao ▴ 50

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1

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903

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sspace assembly size contigs scaffolding

updated 4.2 years ago by Biostar 20 • written 4.2 years ago by deepti1rao ▴ 50

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3

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4.8k

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Reference Assembly

updated 5.5 years ago by jean.elbers ★ 1.7k • written 5.5 years ago by deepti1rao ▴ 50

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6

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1.4k

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Variant Consensus Genome assembly Heterozygous

5.5 years ago by deepti1rao ▴ 50

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9

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5.4k

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7 follow

snps density chromosome R

updated 5.5 years ago by bernatgel ★ 3.4k • written 5.7 years ago by deepti1rao ▴ 50

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1.1k

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vcf plant missense snps SIFT

5.7 years ago by deepti1rao ▴ 50

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2

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1.9k

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Nx N50 soapdenovo Assembly L50

updated 5.8 years ago by Tm ★ 1.1k • written 6.0 years ago by deepti1rao ▴ 50

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4

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1.2k

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Annotation Variants

5.9 years ago by deepti1rao ▴ 50

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1.4k

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SSPACE error insert size read pairs Assembly

5.9 years ago by deepti1rao ▴ 50

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1

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804

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scaffolding reads velvet

updated 5.9 years ago by Tm ★ 1.1k • written 5.9 years ago by deepti1rao ▴ 50

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5

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2.5k

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sspace scaffolding contigs insert size bbmap

updated 5.9 years ago by Ram 43k • written 5.9 years ago by deepti1rao ▴ 50

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6

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1.9k

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Blat Contigs Alignment

updated 6.0 years ago by h.mon 35k • written 6.0 years ago by deepti1rao ▴ 50

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1

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2.5k

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Blast Subject Coordinates

updated 6.0 years ago by Ram 43k • written 6.0 years ago by deepti1rao ▴ 50

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7

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4.5k

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indel GATK indelrealigner

updated 6.0 years ago by Jorge Amigo 14k • written 6.0 years ago by deepti1rao ▴ 50

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8

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2.5k

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6 follow

velvet Assembly kmer coverage cut off

updated 6.0 years ago by Rohit ★ 1.5k • written 6.0 years ago by deepti1rao ▴ 50

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2

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1.3k

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kmer poisson distribution

updated 6.1 years ago by h.mon 35k • written 6.1 years ago by deepti1rao ▴ 50

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kmer distribution Assembly

updated 6.1 years ago by h.mon 35k • written 6.1 years ago by deepti1rao ▴ 50

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1.3k

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kmergenie paired end kmer

updated 6.2 years ago by Biostar 20 • written 6.3 years ago by deepti1rao ▴ 50

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1

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996

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Annotation

6.3 years ago by deepti1rao ▴ 50

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3

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1.9k

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bbduk bbmap reads pre-processing

updated 6.4 years ago by GenoMax 141k • written 6.4 years ago by deepti1rao ▴ 50

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5

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2.5k

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insert bbmerge

updated 6.4 years ago by GenoMax 141k • written 6.4 years ago by deepti1rao ▴ 50

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8

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3.3k

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prinseq reads preprocessing qual trim

6.4 years ago by deepti1rao ▴ 50

3

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2

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2.3k

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reference genome BED fasta consensus

updated 6.7 years ago by Matt Shirley 10k • written 6.7 years ago by deepti1rao ▴ 50

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16

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3.7k

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samtools rmdup duplicates pre-processed reads

updated 6.7 years ago by GenoMax 141k • written 6.7 years ago by deepti1rao ▴ 50

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1.1k

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PAN genome Aligner

6.7 years ago by deepti1rao ▴ 50

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3

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2.3k

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illumina reads quality scores

updated 6.7 years ago by Devon Ryan 104k • written 6.7 years ago by deepti1rao ▴ 50

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1

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1.8k

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Assembly NGS

updated 6.7 years ago by Jean-Karim Heriche 27k • written 6.7 years ago by deepti1rao ▴ 50

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7

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1.6k

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blast Aligner

updated 6.7 years ago by Matteo Schiavinato ★ 3.6k • written 6.7 years ago by deepti1rao ▴ 50

4

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10

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5.0k

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Ngs Reads Processing Trimming Quality

updated 8 months ago by AISHA ▴ 130 • written 6.7 years ago by deepti1rao ▴ 50