User: miglanivarnika.26

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Posts by miglanivarnika.26

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Comment: C: Please explain the significance of following terms used in cytoscape.
... ohkk, Thank you so much ...
written 4 months ago by miglanivarnika.2610
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Comment: C: Please explain the significance of following terms used in cytoscape.
... Yaa, right. what is the significance of coexpression, score, cooccurence and score? ...
written 4 months ago by miglanivarnika.2610
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Answer: A: PPI data network
... Ok, Thank you, This was really helpful ...
written 4 months ago by miglanivarnika.2610
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Comment: C: Katz centrality of nodes.
... okk.. Thank you so much ...
written 4 months ago by miglanivarnika.2610
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Please explain the significance of following terms used in cytoscape.
... What does these mean? and what is the significance of score when I use different data source, like PubMed query or Disease query etc. "SUID","coexpression","cooccurrence","databases","experiments","interaction","name","neighborhood","score","selected","shared interaction","shared name","textmining ...
gene genome written 4 months ago by miglanivarnika.2610
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Comment: C: Katz centrality of nodes.
... Networkx module is for the katz centrality of a gene, but I want it for two classes of genes. I have done that but it's not giving me correct answer. ...
written 4 months ago by miglanivarnika.2610
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Katz centrality of nodes.
... Hey, How to calculate Katz centrality of genes using python? Thank you in advance Please help me ...
gene written 4 months ago by miglanivarnika.2610 • updated 4 months ago by Jean-Karim Heriche13k
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PPI data network
... Hi! I want to build a PPI network by union of three PPI databases. How should I do that, Is there an online tool to do so? If yes then which one and how to do the above stated task. Thank you in advance. Please help me. ...
genome gene written 4 months ago by miglanivarnika.2610
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Color scheme in Cytoscape
... I am using cytoscape and getting nodes of different color i.e. orange, green and blue. Can you please tell me what does the color scheme implies and are these the default colors? And what does orange, green and blue signify. For instance yellow means that that particular node is being searched. kind ...
gene genome cytoscape written 4 months ago by miglanivarnika.2610 • updated 4 months ago by Jean-Karim Heriche13k
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Comment: C: Protein protein interaction
... What does the graph tell us? Like which of them are proteins, which of them are genes etc. Please acquaint me with this. I am new to usage of cytoscape, rather I am new to the field and I have not got any tutorials or documentation, that could be a benefit. ...
written 4 months ago by miglanivarnika.2610

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