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Posts by 932477002
... Hi all, when doing 16S analysis in QIIME2, should I do rarefaction before calculating the alpha and beta diversity. There are a lot of debates on this question. ...
... Hi, everyone I was analyzing a vriome dataset these days. I aligned about 30 milions reads with the length of 150 bp to the NT database with BLASTn (I used botiew2 as well for confirming). Around 10 milions reads were mapped to the same gene on the basis of e-value (1e-10), but with low query cove ...
... Hi, alls I was dealing with a metagenome dataset. After prediction, I have created a catalogue consisting of all genes found from the dataset, and now I want to extrcat gene profiles (i.e. a list of genes with relative abundance). Do you know what tools can be used to profile the gene abundance ...
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