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997
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Answer: Answer: Errors with GSEA using clusterProfiler
12 weeks ago by yura.grabovska ▴ 420
3
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1
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521
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Answer: Answer: Open the Seurat count matrix in RStudio
12 weeks ago by yura.grabovska ▴ 420
0
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0
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289
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Answer: Answer: GSVA Setup
12 weeks ago by yura.grabovska ▴ 420
0
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0
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491
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Comment: Comment: QC filtering for 10x Single Cell Gene Expression Flex Fixed RNA Profiling
3 months ago by yura.grabovska ▴ 420
0
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3
replies
491
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QC filtering for 10x Single Cell Gene Expression Flex Fixed RNA Profiling
10x Seurat scRNA-Seq
3 months ago by yura.grabovska ▴ 420
0
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0
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392
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Answer: Answer: RNA seq
updated 3 months ago by 44k • written 3 months ago by ▴ 420
2
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0
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425
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Understanding behaviour of SCTransform in Seurat
Seurat scRNASeq normalization
updated 4 months ago by 145k • written 4 months ago by ▴ 420
1
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1
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511
views
Comment: Comment: Can 5' and 3' scRNAseq be processed with the same pipeline?
4 months ago by yura.grabovska ▴ 420
1
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1
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511
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Answer: Answer: Can 5' and 3' scRNAseq be processed with the same pipeline?
4 months ago by yura.grabovska ▴ 420
0
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1
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495
views
Seurat v5 and how to correctly integrate across multiple experiments
Seurat scRNA R
updated 4 months ago by ★ 3.0k • written 4 months ago by ▴ 420
1
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1
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2.1k
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Answer: Answer: Confusing results from FindConservedMarkers in Seurat
9 months ago by yura.grabovska ▴ 420
1
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1
reply
629
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Answer: Answer: Extracting GSEA gene rankings from gseaResult object
9 months ago by yura.grabovska ▴ 420
1
vote
1
reply
569
views
Dealing with very large gene-lists in GSEA
R fgsea GSEA
updated 17 months ago by ★ 1.8k • written 17 months ago by ▴ 420
0
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0
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679
views
Answer: Answer: boxplot issue
updated 17 months ago by 44k • written 17 months ago by ▴ 420
0
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0
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631
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Answer: Answer: heatmap issue
17 months ago by yura.grabovska ▴ 420
0
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0
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408
views
How to format matrix with negative values for NMF in R
nmf R matrix
19 months ago by yura.grabovska ▴ 420
0
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0
replies
507
views
Most appropriate method to analysing multi-plate single concentration drug screening
statistics screening drug
21 months ago by yura.grabovska ▴ 420
0
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0
replies
358
views
SinEx DB 2.0 local version
SEG exons genes
23 months ago by yura.grabovska ▴ 420
0
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0
replies
333
views
Annotate peptide sequence with source exon
protein R biomaRt
updated 2.0 years ago by 145k • written 2.0 years ago by ▴ 420
7
votes
2
replies
1.8k
views
Retrieve and count variable barcodes from pooled sequencing fastq
NGS fastq barcodes
updated 2.8 years ago by 8.6k • written 2.8 years ago by ▴ 420
0
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0
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764
views
Comment: Comment: Automatically annotate drugs for their targets
2.9 years ago by yura.grabovska ▴ 420
1
vote
2
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764
views
Automatically annotate drugs for their targets
drugs annotation
updated 2.9 years ago by ★ 2.2k • written 2.9 years ago by ▴ 420
0
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1
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1.2k
views
Comment: C: Is a paired Wilcoxon test appropriate for analysis of CRISPR gene knock-out scre
4.0 years ago by yura.grabovska ▴ 420
6
votes
2
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1.2k
views
Is a paired Wilcoxon test appropriate for analysis of CRISPR gene knock-out screen counts?
R gene sequencing
updated 4.0 years ago by 84k • written 4.0 years ago by ▴ 420
0
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1
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5.5k
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Comment: C: Using limma to find differentially methylated probes across clusters
7.3 years ago by yura.grabovska ▴ 420
0
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1
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2.4k
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Comment: C: minfi out of band probes
7.3 years ago by yura.grabovska ▴ 420
0
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1
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2.4k
views
Answer: A: minfi out of band probes
7.3 years ago by yura.grabovska ▴ 420
0
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4
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5.5k
views
Using limma to find differentially methylated probes across clusters
R methylation limma contrasts
7.3 years ago by yura.grabovska ▴ 420
78 results • Page 2 of 2
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