User: leireahedo02

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Posts by leireahedo02

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Comment: C: Obtaining A Dump Of Pubmed Abstracts Based On Keywords
... I have installed metapub (pip install metapub==0.4.3.6) but when I tried to use the code I obtained the error: ModuleNotFoundError: No module named 'metapub'. Any idea about what is wrong?. I'm a beginner in Python ...
written 10 months ago by leireahedo020
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Pathway analysis: GeneMania with multiple input gene
... Dear Bisostars, Hi I'm trying to check for network gene-gene interaction of a list of genes, using a Python script (http://genemania.org/link?o=3702&g=PHYB|ELF3|COP1|SPA1|FUS9) which is provided in the manual. Surprisingly, it doesn't work. Does anyone know how to use it, or any similar API easy ...
gene python pathways written 11 months ago by leireahedo020
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Comment: C: Map rs to gene symbol in python script
... Thank you Pierre. Easy to understand and concise solution, great help ...
written 11 months ago by leireahedo020
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Map rs to gene symbol in python script
... I have snp ids (rs18008665, rs3212227...) Now, I want to map these snp ids to gene symbols using Python script. I have found similar post, but as I have recently started to learn programing and with no bioinformatics knowledge, I´m unable to create the python script which works. Any script example ...
gene python script snp written 12 months ago by leireahedo020 • updated 12 months ago by Pierre Lindenbaum108k

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