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Posts by victorv888
... So the objetive of my "cherry-picking (lol?)" I that I'm using a genome assembly pipeline that does 20 random subsamplings to down the coverage to 150x in every subsampling and then do the consensus to reconstruct the genome. The problem is that I have some samples where coverage is so huge in some ...
... So I have a bam file with a huge coverage in some regions and I want to subsample randomly only reads that cover that zones, without sampling reads that cover zones of low coverages. Is there any tool or something? Thanks! ...
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