User: victorv888

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victorv8880
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Posts by victorv888

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Comment: C: Random downsampling without replacement in bam files only in regions with covera
... So the objetive of my "cherry-picking (lol?)" I that I'm using a genome assembly pipeline that does 20 random subsamplings to down the coverage to 150x in every subsampling and then do the consensus to reconstruct the genome. The problem is that I have some samples where coverage is so huge in some ...
written 12 months ago by victorv8880
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Random downsampling without replacement in bam files only in regions with coverage>x
... So I have a bam file with a huge coverage in some regions and I want to subsample randomly only reads that cover that zones, without sampling reads that cover zones of low coverages. Is there any tool or something? Thanks! ...
reads bam coverage written 12 months ago by victorv8880

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