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C: Recommendations on FAIRE-seq/ATAC-seq optimal coverage for large genome
3.3 years ago by
nanoide
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1.3k
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Comment:
C: Help interpretating DESeq2 output
3.3 years ago by
nanoide
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1.3k
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Comment:
C: Help interpretating DESeq2 output
3.3 years ago by
nanoide
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1
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1.3k
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Comment:
C: Help interpretating DESeq2 output
3.3 years ago by
nanoide
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1
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1.3k
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Comment:
C: How to add a flag to a sam/bam file
4.1 years ago by
nanoide
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4.6k
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Comment:
C: ATAC-seq TSS profile plot interpretation
4.3 years ago by
nanoide
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4.6k
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Comment:
C: ATAC-seq TSS profile plot interpretation
4.3 years ago by
nanoide
▴ 120
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1
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4.6k
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Comment:
C: ATAC-seq V-plot interpretation
4.3 years ago by
nanoide
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4.6k
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Comment:
C: ATAC-seq V-plot interpretation
4.3 years ago by
nanoide
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3.1k
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Comment:
C: Merging the output of salmon for RNA-seq counting with paired-end and single-end
4.6 years ago by
nanoide
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7.9k
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Comment:
C: samtools markdup vs PICARD's MarkDuplicates when removing duplicated reads
4.7 years ago by
nanoide
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Comment:
C: samtools markdup vs PICARD's MarkDuplicates when removing duplicated reads
4.7 years ago by
nanoide
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2.1k
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Comment:
C: Question about exon/intron counting in RNA-seq dataset analysis
4.9 years ago by
nanoide
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8.8k
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Comment:
A: MACS2 --SPMR and --nolambda usage for version 2.1.2
5.0 years ago by
nanoide
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5.8k
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Comment:
C: Running STAR aligner with paired-end and single-end reads simultaneously
5.0 years ago by
nanoide
▴ 120
0
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5.8k
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Comment:
A: Running STAR aligner with paired-end and single-end reads simultaneously
5.0 years ago by
nanoide
▴ 120
0
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2.0k
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Comment:
C: Getting motif instances corresponding to regions
5.0 years ago by
nanoide
▴ 120
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2.0k
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Comment:
C: Getting motif instances corresponding to regions
5.0 years ago by
nanoide
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5.8k
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Comment:
C: Running STAR aligner with paired-end and single-end reads simultaneously
5.0 years ago by
nanoide
▴ 120
0
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1
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5.8k
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Comment:
C: Running STAR aligner with paired-end and single-end reads simultaneously
5.0 years ago by
nanoide
▴ 120
1
vote
1
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4.2k
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Comment:
C: Differences between motif enrichment analysis and footprinting in the context of
5.0 years ago by
nanoide
▴ 120
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5.8k
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Comment:
A: Running STAR aligner with paired-end and single-end reads simultaneously
5.0 years ago by
nanoide
▴ 120
0
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0
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5.8k
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Comment:
C: Running STAR aligner with paired-end and single-end reads simultaneously
5.0 years ago by
nanoide
▴ 120
0
votes
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4.3k
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Comment:
C: TPKM vs FPKM
5.4 years ago by
nanoide
▴ 120
0
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1
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4.3k
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Comment:
C: TPKM vs FPKM
5.4 years ago by
nanoide
▴ 120
0
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4.3k
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Comment:
C: TPKM vs FPKM
5.4 years ago by
nanoide
▴ 120
0
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1.7k
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Comment:
C: How to get regions with mapped reads
5.5 years ago by
nanoide
▴ 120
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1.7k
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Comment:
C: How to get regions with mapped reads
5.5 years ago by
nanoide
▴ 120
0
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0
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1.7k
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Comment:
C: Ovation RNA-seq system, bionfomatic alignment and htseq-count
5.5 years ago by
nanoide
▴ 120
0
votes
2
replies
1.7k
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Comment:
C: Ovation RNA-seq system, bionfomatic alignment and htseq-count
5.5 years ago by
nanoide
▴ 120
0
votes
1
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4.9k
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Comment:
C: Can I convert normalized counts from DESEQ2 into fpkm?
5.6 years ago by
nanoide
▴ 120
0
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1
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4.9k
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Comment:
C: Can I convert normalized counts from DESEQ2 into fpkm?
5.6 years ago by
nanoide
▴ 120
0
votes
0
replies
3.1k
views
Comment:
A: Remove secondary alignments in RNA-seq analysis?
5.7 years ago by
nanoide
▴ 120
0
votes
1
reply
3.4k
views
Comment:
C: Doubt using HOMER annotatePeaks.pl
5.8 years ago by
nanoide
▴ 120
0
votes
0
replies
6.6k
views
Comment:
C: ATAC-seq macs2 peak calling bampe mode extension shift
5.8 years ago by
nanoide
▴ 120
0
votes
1
reply
6.6k
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Comment:
C: ATAC-seq macs2 peak calling bampe mode extension shift
5.8 years ago by
nanoide
▴ 120
0
votes
0
replies
6.6k
views
Comment:
C: ATAC-seq macs2 peak calling bampe mode extension shift
5.8 years ago by
nanoide
▴ 120
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