User: me.sr1510

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me.sr15100
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Posts by me.sr1510

<prev • 22 results • page 1 of 3 • next >
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microarray data analysis
... Hello everyone My doubt is that can we compare the analysis result of different platforms of microarray. I have done d analysis using the GEO.2R the result file contains the pvalue log2FC and gene name. These columns are extracted from the file. Similarly it is done for another study done of differe ...
gene written 7 months ago by me.sr15100 • updated 7 months ago by russhh4.1k
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Comment: C: KEGG CONVERTER - KGML to SBML
... YeSS that's the one I m talking abt.... ...
written 9 months ago by me.sr15100
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KEGG CONVERTER - KGML to SBML
... hi everyone, I have to make the KEGG pathway downloaded in form of KGML compatible to cell designer for model building. As per my information I have to convert it to SBML. I searched and found KEGG Converter software which can be used for this purpose. I have been trying to use it but i m getting ...
software error written 9 months ago by me.sr15100 • updated 9 months ago by draeger0
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Comment: C: p value and adjusted p value in microarray data analysis
... Sir, what is difference between adjusted p-value and p-value? which one is better to use? ...
written 9 months ago by me.sr15100
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Comment: C: Gene Prediction Softwares
... Sorry for the vagueness. U are right, I want to annotate the genes. I m trying to use geneSCF for the same as it is command-line based but I have NM and NR ids becoz of which it is giving errors. So kindly guide further. Is there any other command-line based annotation tool or any R package for the ...
written 10 months ago by me.sr15100
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Gene Prediction Softwares
... Hi everyone!!! I have a list of 54000 gene-ids I want to annotate all the genes. Is there any other R package or command-line software that I can use? Plz help!!! ...
gene written 10 months ago by me.sr15100 • updated 10 months ago by Macspider2.6k
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Comment: C: Gene Set Clustering based on Functional annotation (GeneSCF)
... I have a list of 54000 gene-ids I want to annotate all the genes. Is there any other R package or command-line software that I can use? ...
written 10 months ago by me.sr15100
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Comment: C: Gene Set Clustering based on Functional annotation (GeneSCF)
... OS -: Ubuntu 16.04 LIST -: NR_046289 NR_046290 NR_046292 NR_046293 NR_046294 NR_046295 NR_046297 NR_046298 NR_046299 NR_046308 NR_046310 NR_046311 NR_046312 NR_046313 Per line one gene-id is present ...
written 10 months ago by me.sr15100
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Comment: C: Gene Set Clustering based on Functional annotation (GeneSCF)
... COMMAND-: ./prepare_database -db=GO -org=goa_human ERROR-: rm: cannot remove '/home/ibab/software/geneSCF-master-source-v1.1-p2/class/lib/db/gene_info_limit.gz': No such file or directory Hello everyone!!!! I read the above conversation still i m confused as to why i m getting this error. I tried d ...
written 10 months ago by me.sr15100
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Comment: C: Diff Gene Expression On Multiple Biological Conditions : Deseq
... Is there any offline tool for the same? I have a similar situation. ...
written 10 months ago by me.sr15100

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