User: email2mrna

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Posts by email2mrna

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Comment: C: HGNC gene family hierarchy
... Thanks for the response. However I am looking for the data describing the relationship between different gene family. The file ftp://ftp.ebi.ac.uk/pub/databases/genenames/new/tsv/genefamilies.txt describes is same to what I have but do not contains gene family hierarchy information. See my Note for ...
written 11 months ago by email2mrna0
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HGNC gene family hierarchy
... Where can I download the HGNC gene family hierarchy? In the download section https://www.genenames.org/cgi-bin/statistics I can find the data as flat file ("New HGNC Gene Family dataset"). However I want the data which indicated the tree as at the top of the page https://www.genenames.org/cgi-bin/ge ...
hgnc data gene family gene family hierarchy written 11 months ago by email2mrna0
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gene set enrichment analysis for continuous phenotype
... I want to do gene set enrichment analysis but outcome (phenotype) of the data is continuous. Is there any method in R to perform gene set enrichment analysis for continuous phenotype? ...
R gene set enrichment analysis tools gsea written 14 months ago by email2mrna0
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multi-omics data gene set enrichment analysis
... I have multi-omics data (RNASeq, methylation and mutation) belonging to same sample and I want to do gene set enrichment analysis using all the data at once. What are the tool in R/Bioconductor to do gene set enrichment analysis of multiple omics dataset? ...
R gene set enrichment analysis gsea omics written 16 months ago by email2mrna0 • updated 16 months ago by EagleEye5.9k

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