Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
1.8k
views
Comment: C: tools for 10X scRNA-seq counts
5.6 years ago by GouthamAtla 12k
0
votes
0
replies
1.5k
views
Comment: C: Differential gene expression
5.6 years ago by GouthamAtla 12k
0
votes
0
replies
1.6k
views
Answer: A: Extract longest mRNA from .GFF when I have multiple rows of same seqID
5.6 years ago by GouthamAtla 12k
1
vote
0
replies
1.4k
views
Answer: A: Coverage of target genes
5.6 years ago by GouthamAtla 12k
0
votes
1
reply
2.2k
views
Comment: C: how to label one gene only inside my volcano plot? or to show the gene names but
5.6 years ago by GouthamAtla 12k
1
vote
1
reply
2.2k
views
Answer: A: how to label one gene only inside my volcano plot? or to show the gene names but
5.6 years ago by GouthamAtla 12k
0
votes
0
replies
1.5k
views
Answer: A: Differential gene expression
5.6 years ago by GouthamAtla 12k
1
vote
0
replies
1.2k
views
Comment: C: ChIP to genes
5.6 years ago by GouthamAtla 12k
0
votes
0
replies
1.4k
views
Comment: C: passing vcf.gz and vcg.gz.tbi files in tabix comand while doing range search
5.6 years ago by GouthamAtla 12k
0
votes
1
reply
8.8k
views
Answer: A: Annotation of Single Cell Clusters
5.6 years ago by GouthamAtla 12k
2
votes
0
replies
1.9k
views
Answer: A: RNA-Seq analysis of data from different platforms
5.6 years ago by GouthamAtla 12k
1
vote
0
replies
2.0k
views
Answer: A: How to use Hi-C data?
5.6 years ago by GouthamAtla 12k
2
votes
0
replies
2.8k
views
Answer: A: Can I use the SCENIC package to analyze the transcription factors in the bulk RN
5.6 years ago by GouthamAtla 12k
1
vote
1
reply
4.0k
views
Answer: A: Weird MA-plot (DESeq2)
5.6 years ago by GouthamAtla 12k
0
votes
1
reply
3.0k
views
Comment: C: Soft filtering of SNPs in a list
5.6 years ago by GouthamAtla 12k
1
vote
0
replies
1.7k
views
Answer: A: Annotating narrow.peak to promoter region using GenomicFeatures
5.6 years ago by GouthamAtla 12k
1
vote
0
replies
5.7k
views
Comment: C: Cutadapt for loop issue
5.6 years ago by GouthamAtla 12k
2
votes
1
reply
5.7k
views
Comment: C: Cutadapt for loop issue
5.6 years ago by GouthamAtla 12k
1
vote
2
replies
5.7k
views
Answer: A: Cutadapt for loop issue
5.6 years ago by GouthamAtla 12k
0
votes
1
reply
4.4k
views
Comment: C: Feature selected-genes vs. differentially expressed genes
5.6 years ago by GouthamAtla 12k
0
votes
0
replies
2.0k
views
Comment: C: CALCULATING Z-SCORE from GWAS summary statistics.
5.6 years ago by GouthamAtla 12k
2
votes
1
reply
2.3k
views
Comment: C: HOMER error -bash: ./ctcf.motif: Permission denied
5.6 years ago by GouthamAtla 12k
1
vote
0
replies
3.4k
views
Comment: C: Computing significance of overlap between two gene lists in Python
5.6 years ago by GouthamAtla 12k
1
vote
2
replies
157k
views
Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 5.7 years ago by 45k • written 10.8 years ago by 12k
109
votes
15
replies
129k
views
16 follow
Convertion Of Gff3 To Gtf
gtf gff
updated 20 months ago by ▴ 140 • written 13.5 years ago by 12k
0
votes
1
reply
4.5k
views
Comment: C: Differential binding analysis of motif-containing peaks
updated 5.8 years ago by 45k • written 9.8 years ago by 12k
2
votes
1
reply
4.5k
views
Answer: A: Differential binding analysis of motif-containing peaks
updated 5.8 years ago by 45k • written 9.8 years ago by 12k
0
votes
1
reply
4.1k
views
Answer: A: bedtools intersect: keep pairing consistent
updated 5.8 years ago by 45k • written 9.8 years ago by 12k
0
votes
1
reply
4.1k
views
Comment: C: bedtools intersect: keep pairing consistent
updated 5.8 years ago by 45k • written 9.8 years ago by 12k
0
votes
1
reply
4.1k
views
Comment: C: bedtools intersect: keep pairing consistent
updated 5.8 years ago by 45k • written 9.8 years ago by 12k
0
votes
0
replies
38k
views
Comment: C: Estimating Insert Size From Paired End Data.
updated 5.9 years ago by 45k • written 11.7 years ago by 12k
0
votes
1
reply
13k
views
Comment: C: FreeBayes vs GATK's HaplotypeCaller
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
0
votes
1
reply
5.8k
views
Comment: C: Extract Sequences From [Gtf File] + [Genome Fasta File], combine matching XLOCs
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
0
votes
2
replies
5.8k
views
Answer: A: Extract Sequences From [Gtf File] + [Genome Fasta File], combine matching XLOCs
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
0
votes
0
replies
1.8k
views
Comment: C: identification of genes from contigs using reference genome
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
2
votes
1
reply
5.9k
views
Answer: Answer: How to find sequence patterns in genome?
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
0
votes
0
replies
4.2k
views
Comment: C: Can I convert a .mol to a .pdb
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
0
votes
1
reply
4.2k
views
Comment: C: Can I convert a .mol to a .pdb
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
0
votes
1
reply
2.7k
views
Comment: C: how sequenced? dna between the pair-end reads
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
0
votes
1
reply
9.4k
views
Comment: C: BLAST source code
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
3
votes
1
reply
6.5k
views
Answer: Answer: HOWTO extract regions from GRanges object
updated 3.3 years ago by 45k • written 9.8 years ago by 12k
1
vote
0
replies
8.8k
views
Answer: A: Where can i find some bacterial RNA-Seq data?
updated 5.9 years ago by 45k • written 11.6 years ago by 12k
0
votes
1
reply
3.1k
views
Comment: C: chip-seq (histone modifications) and rna-seq data for benchmarking
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
3
votes
1
reply
3.8k
views
Answer: A: Pipeline for RNA-seq analysis
updated 5.9 years ago by 45k • written 9.8 years ago by 12k
0
votes
0
replies
4.2k
views
Comment: C: How to get individual chromosome sequence in fasta format from vcf.gz and its vc
updated 5.9 years ago by 45k • written 9.9 years ago by 12k
2
votes
1
reply
4.2k
views
Answer: Answer: How to get individual chromosome sequence in fasta format from vcf.gz and its vc
updated 3.3 years ago by 45k • written 9.9 years ago by 12k
0
votes
0
replies
3.9k
views
Comment: C: annote gene position using hg19
updated 5.9 years ago by 45k • written 9.9 years ago by 12k
3
votes
1
reply
5.9k
views
Answer: A: How to extract coordinates of first exons from .gtf file.
updated 5.9 years ago by 45k • written 9.9 years ago by 12k
3
votes
0
replies
8.7k
views
Answer: Answer: how to retrieve the nucleotide/base in a certain position using any programming
updated 3 months ago by 45k • written 9.9 years ago by 12k
0
votes
1
reply
3.4k
views
Comment: C: Retriving the base and its quality from fastq file
updated 5.9 years ago by 45k • written 9.9 years ago by 12k
1,492 results • Page 3 of 30
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6