Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
0
votes
0
replies
879
views
Comment: Comment: Obtaining directionality of pathways
11 weeks ago by darklings ▴ 480
5
votes
0
replies
464
views
Answer: Answer: How to get experience as a bioinformatics software developer
10 months ago by darklings ▴ 480
0
votes
0
replies
2.0k
views
Comment: Comment: genefu for PAM50 prediction
10 months ago by darklings ▴ 480
0
votes
0
replies
1.7k
views
Answer: Answer: how can i convert my gene list to a format that reactome recognises?
18 months ago by darklings ▴ 480
0
votes
0
replies
1.4k
views
Comment: Comment: Looping over a function in R, and needing a variable name to save output as uniq
19 months ago by darklings ▴ 480
0
votes
1
reply
1.4k
views
Comment: Comment: Looping over a function in R, and needing a variable name to save output as uniq
19 months ago by darklings ▴ 480
1
vote
1
reply
1.4k
views
Answer: Answer: Looping over a function in R, and needing a variable name to save output as uniq
19 months ago by darklings ▴ 480
1
vote
0
replies
1.5k
views
Answer: Answer: How to find the functions of Reactome pathways?
19 months ago by darklings ▴ 480
0
votes
0
replies
9.4k
views
Comment: Comment: "[E::bgzf_read] Read block operation failed" error - possible truncation/corrupt
20 months ago by darklings ▴ 480
0
votes
1
reply
9.4k
views
Comment: Comment: "[E::bgzf_read] Read block operation failed" error - possible truncation/corrupt
20 months ago by darklings ▴ 480
0
votes
0
replies
1.3k
views
Comment: Comment: How can I join multiple columns from different datasets together in R?
20 months ago by darklings ▴ 480
0
votes
1
reply
561
views
Answer: Answer: TWAS analysis
20 months ago by darklings ▴ 480
0
votes
0
replies
1.4k
views
Answer: Answer: Using R Studio on Cloud
20 months ago by darklings ▴ 480
0
votes
0
replies
447
views
Comment: Comment: Predicting Drug responds from somatic mutations
21 months ago by darklings ▴ 480
0
votes
0
replies
836
views
Answer: Answer: Diseases related pathways
21 months ago by darklings ▴ 480
1
vote
0
replies
809
views
Comment: Comment: Reactome website gene expression analysis
21 months ago by darklings ▴ 480
0
votes
0
replies
1.6k
views
Comment: Comment: Convert multiple rows value retrieved from ensemble biomart to comma separated
22 months ago by darklings ▴ 480
1
vote
0
replies
3.0k
views
Answer: Answer: Getting all gene members in a Reactome Pathway
22 months ago by darklings ▴ 480
0
votes
0
replies
821
views
Answer: Answer: Reactome reaction enumeration with DefinedSets
22 months ago by darklings ▴ 480
0
votes
0
replies
1.4k
views
Comment: Comment: How to add space in specific location in a barplot using ggplot2
22 months ago by darklings ▴ 480
0
votes
1
reply
1.4k
views
Comment: Comment: How to add space in specific location in a barplot using ggplot2
22 months ago by darklings ▴ 480
0
votes
0
replies
1.5k
views
Answer: Answer: Reactome Pathway Analysis from command line
22 months ago by darklings ▴ 480
3
votes
0
replies
3.8k
views
Answer: A: Is there a way to visualize log fold changes for Reactome pathways in R?
23 months ago by darklings ▴ 480
0
votes
0
replies
678
views
Answer: A: overlay of DE data on reactome pathway
23 months ago by darklings ▴ 480
0
votes
0
replies
2.4k
views
Answer: Answer: Graph viewer for Reactome Pathways
updated 4 weeks ago by 37k • written 23 months ago by ▴ 480
1
vote
0
replies
655
views
Comment: C: Annotating gene names: Why having different number of ensembl IDs using biomaRt
updated 24 months ago by 37k • written 24 months ago by ▴ 480
13
votes
4
replies
22k
views
Answer: A: installing samtools with conda - overcoming two common errors
2.1 years ago by darklings ▴ 480
0
votes
0
replies
791
views
Answer: A: Incomplete reactome.org all pathway level to ENSEMBL ID annotation files
2.2 years ago by darklings ▴ 480
2
votes
0
replies
1.3k
views
Comment: C: Is it good to merge transcripts tpm to gene which is of different gene type?
2.3 years ago by darklings ▴ 480
8
votes
8
replies
3.5k
views
Which RNA-seq unit should be used in machine learning models?
RNA-Seq machine learning counts
2.3 years ago by darklings ▴ 480
2
votes
0
replies
1.5k
views
Answer: A: How can I know when a pathway was included in Reactome?
2.3 years ago by darklings ▴ 480
0
votes
1
reply
4.8k
views
Comment: C: Is there a way to get the name or IDs of genes with the goseq table?
3.0 years ago by darklings ▴ 480
0
votes
0
replies
592
views
Comment: C: Getting information about shortening or lengthening of UTRs from RNAseq data
3.1 years ago by darklings ▴ 480
0
votes
0
replies
29k
views
Comment: C: output TMM normalized counts with edgeR
3.1 years ago by darklings ▴ 480
7
votes
2
replies
4.8k
views
Answer: A: Is there a way to get the name or IDs of genes with the goseq table?
3.1 years ago by darklings ▴ 480
0
votes
0
replies
1.4k
views
Comment: C: How to interpret the eQTLs in cancer
3.2 years ago by darklings ▴ 480
0
votes
2
replies
1.4k
views
How to interpret the eQTLs in cancer
RNA-Seq SNP eqtl TCGA
updated 3.2 years ago by ▴ 20 • written 4.1 years ago by ▴ 480
0
votes
1
reply
8.1k
views
Comment: C: Best-suited unit of expression to perform between-sample comparison
3.6 years ago by darklings ▴ 480
1
vote
1
reply
8.1k
views
Comment: C: Best-suited unit of expression to perform between-sample comparison
3.6 years ago by darklings ▴ 480
1
vote
1
reply
2.0k
views
Answer: A: genefu for PAM50 prediction
3.6 years ago by darklings ▴ 480
4
votes
1
reply
3.5k
views
Answer: A: What kind of unit of RNA-seq should be used in machine learning models?
3.6 years ago by darklings ▴ 480
0
votes
0
replies
3.5k
views
Comment: C: What kind of unit of RNA-seq should be used in machine learning models?
3.6 years ago by darklings ▴ 480
0
votes
0
replies
1.8k
views
Comment: C: issues with GTEx data annotation files
4.1 years ago by darklings ▴ 480
0
votes
1
reply
1.8k
views
Comment: C: issues with GTEx data annotation files
4.1 years ago by darklings ▴ 480
0
votes
1
reply
191k
views
Comment: C: How To Update R In Ubuntu ?
4.2 years ago by darklings ▴ 480
0
votes
1
reply
3.5k
views
Comment: C: What kind of read counts of RNA-seq should be used in machine learning models?
4.2 years ago by darklings ▴ 480
1
vote
1
reply
3.5k
views
Answer: A: What kind of read counts of RNA-seq should be used in machine learning models?
4.2 years ago by darklings ▴ 480
1
vote
1
reply
1.5k
views
Comment: C: rsID and its link with disease/traits/phenotype
4.2 years ago by darklings ▴ 480
0
votes
0
replies
1.3k
views
Comment: C: How to retrieve Ensembl phenotype data associated with Ensembl variations using
5.3 years ago by darklings ▴ 480
5
votes
2
replies
1.3k
views
How to retrieve Ensembl phenotype data associated with Ensembl variations using Perl API
ensembl perl API
updated 5.3 years ago by ★ 2.2k • written 5.3 years ago by ▴ 480
58 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6