User: lauren.manck

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lauren.manck10
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Posts by lauren.manck

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Comment: C: Presence/absence of proteins blastp nr database
... I am trying to obtain a similar output but using the rpsblast function in the command line. Do you know if there is a way to not only display just the best hit but also only "specific hits" as is given as a result in the web-based version? ...
written 2.8 years ago by lauren.manck10
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Determining "Specific Hits" on Standalone RPS-BLAST
... Hello All I am using the standalone version of BLAST for the first time and have created a local database of PSSMs to try and identify conserved domains of interest in the genomes of various bacteria using the rpsblast function. Is anyone familiar with an effective way to use the blast output given ...
blast written 2.8 years ago by lauren.manck10

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