User: nvucic

gravatar for nvucic
nvucic30
Reputation:
30
Status:
New User
Location:
Last seen:
1 year ago
Joined:
1 year, 3 months ago
Email:
n*****@bio.bg.ac.rs

Posts by nvucic

<prev • 7 results • page 1 of 1 • next >
0
votes
4
answers
2.2k
views
4
answers
Comment: C: Visualization for ChIP-seq analysis
... Thanks Rory, I am using DiffBind for differential ChIP-seq analysis. I usually have two samples with 2-3 replicates, but I have troubles performing analysis on samples without replicates. Therefore, I create replicates by calling peaks with different peak callers (MACS2 and SPP) and perform differen ...
written 13 months ago by nvucic30
0
votes
4
answers
2.2k
views
4
answers
Comment: C: Visualization for ChIP-seq analysis
... Thank you Jared, I am more interested in Command Line tools but EaSeq really caught my attention and I'll definitely give it a try. ...
written 13 months ago by nvucic30
0
votes
4
answers
2.2k
views
4
answers
Comment: C: Visualization for ChIP-seq analysis
... Looks really good, especially chromosome ideogram feature. Thanks. ...
written 13 months ago by nvucic30
1
vote
4
answers
2.2k
views
4
answers
Comment: C: Visualization for ChIP-seq analysis
... Wow, thanks Kevin this is awesome. ...
written 14 months ago by nvucic30
18
votes
4
answers
2.2k
views
13 follow
4
answers
Visualization for ChIP-seq analysis
... Hello guys, from your experience with chip-seq analysis what would be the most useful visual representations of chip-seq results? I am particularly interested in your opinion on visualizations of motif discovery, annotation and differential binding analysis and your experiences with various bioinfo ...
differential analysis motif detection chip-seq written 14 months ago by nvucic30 • updated 13 months ago by simon.vanheeringen170
0
votes
1
answer
489
views
1
answer
Differential ChIP-seq analysis
... Hello everyone, I am interested in differential ChIP-seq analysis. Does anyone know some real validated datasets that are publicly for this kind of analysis? Best regards, Nemanja ...
chip-seq written 14 months ago by nvucic30 • updated 14 months ago by jared.andrews071.5k
2
votes
3
answers
715
views
5 follow
3
answers
NCI-60 RNA-seq data
... Hello, Can someone tell me is it possible and if it is, how to obtain raw RNA-seq data for NCI-60 cell lines from this project: https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA282446? Thank you ...
next-gen raw data rna-seq written 15 months ago by nvucic30 • updated 19 days ago by Praneet Chaturvedi100

Latest awards to nvucic

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1614 users visited in the last hour