User: agrandiadil

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agrandiadil10
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Montpellier
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2 months ago
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3 months ago
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Posts by agrandiadil

<prev • 4 results • page 1 of 1 • next >
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Comment: C: Enrichment analysis: Which tool I should trust?
... I will try to go step by step. Starting with Pscan: In Pscan I choose -900 +50 Jaspar 2016 (because I suppose that is the most accurate). And I obtain the results: -The table I obtain at the right shows us each TF with a p-value. I assume that that p-value is "how significant the enrichment is?". ...
written 10 weeks ago by agrandiadil10
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Comment: C: Enrichment analysis: Which tool I should trust?
... Thank you Santhilal! I already done the Enrichr test but I repeated it in order to show you where I am finding troubles: Among databases they give me different results: http://amp.pharm.mssm.edu/Enrichr/enrich?dataset=2mivb I do understand that there are ChIP, motif and consensus (and others) but ...
written 12 weeks ago by agrandiadil10
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Enrichment analysis: Which tool I should trust?
... Apparently as everybody here, I am a beginner in bioinformatics but I have been entitled with the task of perform an Enrichment analysis. But I am facing troubles trying to obtain **the same data among the different databases.** The main thing: We have many gene lists, and we want to know **which o ...
enrichment tf annotation written 12 weeks ago by agrandiadil10 • updated 12 weeks ago by vchris_ngs4.1k
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Ideas about what can I do with the raw data of gene expression and miRNA of Genechip Affymetrix?
... Hello! I am an internship student and I have given the task to perform analysis in a given data, but now I should propose things to do with the data in order to obtain the most of them, I would really like to add value so I am eager to learn anything, but it should be in a time span of 2-3 months. L ...
R chip-seq rna-seq written 3 months ago by agrandiadil10 • updated 12 weeks ago by gandrescabrera70

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