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Answer:
Answer: RNA-seq with normalized cpm count
3 days ago by
bk11
★ 2.2k
0
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1
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389
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Answer:
Answer: 'Invalid parameter' error to generate a count matrix using featurecounts
8 days ago by
bk11
★ 2.2k
1
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1
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240
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Answer:
Answer: Seurat: CreateSeuratObject error, please help
16 days ago by
bk11
★ 2.2k
3
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0
replies
438
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Answer:
Answer: SHAPEIT5 phasing
20 days ago by
bk11
★ 2.2k
1
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1
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326
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Comment:
Comment: How to find what is the most significantly modulated gene in GEO2R analysis?
5 weeks ago by
bk11
★ 2.2k
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311
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Answer:
Answer: Converting SNP data table into .traw format or qtl (R) format
5 weeks ago by
bk11
★ 2.2k
1
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1
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670
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Comment:
Comment: ensembl - selecting SNPs of specific genes
6 weeks ago by
bk11
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1
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670
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Comment:
Comment: ensembl - selecting SNPs of specific genes
6 weeks ago by
bk11
★ 2.2k
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1
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670
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Comment:
Comment: ensembl - selecting SNPs of specific genes
6 weeks ago by
bk11
★ 2.2k
3
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1
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670
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Answer:
Answer: ensembl - selecting SNPs of specific genes
6 weeks ago by
bk11
★ 2.2k
1
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0
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222
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Answer:
Answer: 1000 genome project specific genes selection
6 weeks ago by
bk11
★ 2.2k
0
votes
0
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380
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Answer:
Answer: reading scRNAseq .h5 file into anndata format from GEO - No clear matrix?
6 weeks ago by
bk11
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0
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255
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Comment:
Comment: X chromosome inactivation
6 weeks ago by
bk11
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0
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0
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247
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Answer:
Answer: GWAS on unbalanced case-control UKB dataset using PLINK2
6 weeks ago by
bk11
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0
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0
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349
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Comment:
Comment: Need suggestions for ROC Curve in R
6 weeks ago by
bk11
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0
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0
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228
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Comment:
Comment: CellPlex CMO highbackground
6 weeks ago by
bk11
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0
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1
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415
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Comment:
Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
7 weeks ago by
bk11
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1
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415
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Comment:
Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
7 weeks ago by
bk11
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0
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1
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250
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Comment:
Comment: How to choose --hwe threshold?
7 weeks ago by
bk11
★ 2.2k
1
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0
replies
341
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Comment:
Comment: Merge seurat list
7 weeks ago by
bk11
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0
votes
0
replies
338
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Comment:
Comment: GO enrichment plot with dotplot strange axis
7 weeks ago by
bk11
★ 2.2k
1
vote
1
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341
views
Answer:
Answer: Merge seurat list
7 weeks ago by
bk11
★ 2.2k
0
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1
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338
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Comment:
Comment: GO enrichment plot with dotplot strange axis
7 weeks ago by
bk11
★ 2.2k
2
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1
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462
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Answer:
Answer: Splitting scRNA seq data from Multiome data(scRNA+ scATAC)
updated 6 weeks ago by
Ram
43k • written 7 weeks ago by
bk11
★ 2.2k
1
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714
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Answer:
Answer: Issues with Merging Seurat Objects: Multiple Counts in Assays Layer
7 weeks ago by
bk11
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0
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439
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Comment:
Comment: How to find SNP locations in assemblies other than hg38
7 weeks ago by
bk11
★ 2.2k
1
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0
replies
273
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Answer:
Answer: Extract information of mapped reads bam files
7 weeks ago by
bk11
★ 2.2k
2
votes
1
reply
894
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Comment:
Comment: Shrink logFC values after edgeR
8 weeks ago by
bk11
★ 2.2k
0
votes
0
replies
220
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Comment:
Comment: Is it possible to identify the strand of an RNA using UMI?
8 weeks ago by
bk11
★ 2.2k
0
votes
1
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454
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Comment:
Comment: Does salmon work with combined short and long read bam file?
8 weeks ago by
bk11
★ 2.2k
0
votes
1
reply
421
views
Comment:
Comment: allele matching between identical genotypes
8 weeks ago by
bk11
★ 2.2k
0
votes
0
replies
202
views
Comment:
Comment: EnhancedVolcanop plot using GSE data
8 weeks ago by
bk11
★ 2.2k
1
vote
1
reply
379
views
Comment:
Comment: 1000G Reference Panel Hg38 Michigan Imputation Server
8 weeks ago by
bk11
★ 2.2k
2
votes
1
reply
528
views
Comment:
Comment: PCA plot interpretation (single population)
8 weeks ago by
bk11
★ 2.2k
0
votes
0
replies
231
views
Answer:
Answer: Obtain rsID GWAS variants (9M)
8 weeks ago by
bk11
★ 2.2k
2
votes
0
replies
238
views
Answer:
Answer: Data scaling in single-cell RNAseq - sample-wise or on the full set?
8 weeks ago by
bk11
★ 2.2k
0
votes
1
reply
325
views
Comment:
Comment: GEO Affymetrix data for differential expression analysis?
10 weeks ago by
bk11
★ 2.2k
1
vote
0
replies
395
views
Comment:
Comment: Transcript Based Annotation of Variants Using Annovar
10 weeks ago by
bk11
★ 2.2k
0
votes
1
reply
344
views
Comment:
Comment: Freyja tool help
10 weeks ago by
bk11
★ 2.2k
1
vote
0
replies
294
views
Answer:
Answer: filter 1000 genome vcf file to keep common snps
10 weeks ago by
bk11
★ 2.2k
0
votes
0
replies
565
views
Answer:
Answer: Liftover - Picard and plink issues when performing liftover from CanFam4 to CanF
11 weeks ago by
bk11
★ 2.2k
1
vote
0
replies
204
views
Comment:
Comment: Extract Domain Architectures from Pfam / Interpro
11 weeks ago by
bk11
★ 2.2k
0
votes
0
replies
248
views
Comment:
Comment: Compute ld and genomic distance using clump function in plink
11 weeks ago by
bk11
★ 2.2k
1
vote
1
reply
860
views
Comment:
Comment: How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objec
3 months ago by
bk11
★ 2.2k
1
vote
1
reply
860
views
Answer:
Answer: How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objec
3 months ago by
bk11
★ 2.2k
0
votes
0
replies
446
views
Comment:
Comment: sample data for plant RNA seq analysis
3 months ago by
bk11
★ 2.2k
1
vote
0
replies
336
views
Comment:
Comment: RNA-Seq and ATAC-Seq quality check
3 months ago by
bk11
★ 2.2k
0
votes
0
replies
646
views
Comment:
Comment: There are several lines in Manhattan plot.
3 months ago by
bk11
★ 2.2k
2
votes
0
replies
294
views
Answer:
Answer: OSCA -open .h5 file
3 months ago by
bk11
★ 2.2k
0
votes
0
replies
466
views
Comment:
Comment: Help with PRS score
3 months ago by
bk11
★ 2.2k
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