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Comment: Comment: About inconsistent cell counts per samples obtained in small nuclear RNAseq data
5 days ago by bk11 ▴ 60
0
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2
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269
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About inconsistent cell counts per samples obtained in small nuclear RNAseq data.
Seurat QC Single-Cell
5 days ago by bk11 ▴ 60
1
vote
0
replies
2.2k
views
Comment: Comment: How to add Seurat Object name in DimPlot title?
17 months ago by bk11 ▴ 60
3
votes
2
replies
2.2k
views
How to add Seurat Object name in DimPlot title?
Seurat R
updated 17 months ago by 12k • written 17 months ago by ▴ 60
1
vote
0
replies
527
views
How to perform custom annotation using garfield_annotate_uk10k.sh script in GARFIELD tool?
awk R GWAS bash
2.2 years ago by bk11 ▴ 60
3
votes
8
replies
1.9k
views
combine columns from multiple files
bash
updated 3.5 years ago by ▴ 100 • written 4.6 years ago by ▴ 60
1
vote
4
replies
2.1k
views
cvnkit: what is the problem here?
CNV NGS
updated 3.8 years ago by 20 • written 5.7 years ago by ▴ 60
2
votes
13
replies
1.9k
views
Extract gene lists using two files
Unix awk shell script
updated 4.0 years ago by 20 • written 5.6 years ago by ▴ 60
0
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0
replies
16k
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Comment: C: Merging bed bim fam files from chromosome 1 to 22 at one time
4.3 years ago by bk11 ▴ 60
1
vote
3
replies
3.3k
views
Problem with newSCESet(countData=all.counts) function
single cell experiment single cell RNA seq
updated 4.4 years ago by 5.7k • written 4.4 years ago by ▴ 60
0
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0
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3.3k
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Comment: C: Problem with newSCESet(countData=all.counts) function
4.4 years ago by bk11 ▴ 60
0
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0
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1.4k
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Comment: C: target gene selection for miRNA
4.4 years ago by bk11 ▴ 60
1
vote
10
replies
2.9k
views
bedtools complement error
bedtools
updated 4.5 years ago by 35k • written 4.5 years ago by ▴ 60
0
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1
reply
2.9k
views
Comment: C: bedtools complement error
4.5 years ago by bk11 ▴ 60
0
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2
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2.9k
views
Comment: C: bedtools complement error
4.5 years ago by bk11 ▴ 60
0
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1
reply
1.6k
views
Comment: C: How to identify RNA-seq mapped reads to reference genome but not identified by f
4.5 years ago by bk11 ▴ 60
0
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1
reply
1.6k
views
Comment: C: How to identify RNA-seq mapped reads to reference genome but not identified by f
4.5 years ago by bk11 ▴ 60
2
votes
6
replies
1.6k
views
How to identify RNA-seq mapped reads to reference genome but not identified by featurecounts of Subread package?
RNA-Seq featureCounts HISAT2
updated 4.5 years ago by ★ 4.0k • written 4.5 years ago by ▴ 60
5
votes
17
replies
2.3k
views
awk and sed in bash script and no output
bash sed awk
updated 4.5 years ago by 35k • written 4.5 years ago by ▴ 60
0
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1
reply
2.3k
views
Comment: C: awk and sed in bash script and no output
4.5 years ago by bk11 ▴ 60
0
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1
reply
2.3k
views
Comment: C: awk and sed in bash script and no output
4.5 years ago by bk11 ▴ 60
0
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0
replies
2.3k
views
Comment: C: awk and sed in bash script and no output
4.5 years ago by bk11 ▴ 60
0
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1
reply
2.3k
views
Comment: C: awk and sed in bash script and no output
4.5 years ago by bk11 ▴ 60
0
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1
reply
1.9k
views
Comment: C: combine columns from multiple files
4.6 years ago by bk11 ▴ 60
0
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1
reply
1.1k
views
Comment: C: Add text in somewhere middle of line using information from the same line in fil
updated 4.6 years ago by 39k • written 4.6 years ago by ▴ 60
1
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1
reply
1.1k
views
Comment: C: Add text in somewhere middle of line using information from the same line in fil
4.6 years ago by bk11 ▴ 60
12
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12
replies
1.1k
views
Add text in somewhere middle of line using information from the same line in file.
sed awk unix
updated 4.6 years ago by 21k • written 4.6 years ago by ▴ 60
0
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1
reply
1.1k
views
Comment: C: Add text in somewhere middle of line using information from the same line in fil
4.6 years ago by bk11 ▴ 60
0
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1
reply
1.1k
views
Comment: C: Heatmap using publicly available Chip-Seq data
4.6 years ago by bk11 ▴ 60
0
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1
reply
1.1k
views
Comment: C: Heatmap using publicly available Chip-Seq data
4.6 years ago by bk11 ▴ 60
0
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5
replies
1.1k
views
Heatmap using publicly available Chip-Seq data
ChIP-Seq heatmap bigBed bigWig Blueprint
4.6 years ago by bk11 ▴ 60
1
vote
3
replies
777
views
Calculating average using information from three different columns of a file.
Unix R Python
updated 4.7 years ago by 11k • written 4.7 years ago by ▴ 60
0
votes
1
reply
2.9k
views
Comment: C: Quantile Normalization in R and output data
4.7 years ago by bk11 ▴ 60
1
vote
3
replies
2.9k
views
Quantile Normalization in R and output data
R Data normalization
4.7 years ago by bk11 ▴ 60
0
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1
reply
15k
views
Comment: C: Quantile Normalization in R
4.7 years ago by bk11 ▴ 60
0
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0
replies
1.7k
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Comment: C: How to extract genes 10000 bp upstream and 1000 bp downstream of long non coding
5.2 years ago by bk11 ▴ 60
8
votes
3
replies
1.7k
views
How to extract genes 10000 bp upstream and 1000 bp downstream of long non coding RNA?
bedops bedtools awk sed bash
updated 5.2 years ago by 35k • written 5.2 years ago by ▴ 60
0
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1
reply
1.3k
views
Comment: C: Extracting genes from one file using coordinate from second file
5.5 years ago by bk11 ▴ 60
0
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1
reply
1.3k
views
Comment: C: Extracting genes from one file using coordinate from second file
5.5 years ago by bk11 ▴ 60
1
vote
5
replies
1.3k
views
Extracting genes from one file using coordinate from second file
awk bash bedoops
updated 5.5 years ago by 35k • written 5.5 years ago by ▴ 60
0
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1
reply
2.8k
views
Comment: C: Circos image for Copy Number Variation
5.6 years ago by bk11 ▴ 60
0
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3
replies
2.8k
views
Circos image for Copy Number Variation
CNV Circos image
updated 5.6 years ago by ▴ 270 • written 5.6 years ago by ▴ 60
0
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1
reply
5.1k
views
Comment: C: Compare between two columns of two different files and print common
5.6 years ago by bk11 ▴ 60
0
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0
replies
5.1k
views
Comment: C: Compare between two columns of two different files and print common
5.6 years ago by bk11 ▴ 60
7
votes
7
replies
5.1k
views
Compare between two columns of two different files and print common
awk bash
updated 22 months ago by 85k • written 5.6 years ago by ▴ 60
0
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0
replies
1.9k
views
Comment: C: Extract gene lists using two files
5.6 years ago by bk11 ▴ 60
0
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2
replies
1.9k
views
Comment: A: Extract gene lists using two files
5.6 years ago by bk11 ▴ 60
0
votes
2
replies
1.9k
views
Comment: C: Extract gene lists using two files
5.6 years ago by bk11 ▴ 60
0
votes
1
reply
1.9k
views
Comment: C: Extract gene lists using two files
5.6 years ago by bk11 ▴ 60
0
votes
1
reply
1.9k
views
Comment: C: Extract gene lists using two files
5.6 years ago by bk11 ▴ 60
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