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Answer: Answer: How to determine n and c terminal nucleotide bases from fasta sequences via R or
5 months ago by bk11 ★ 3.1k
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579
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Comment: Comment: Cellranger: Demux pooled (hashing antibodies) GEX and VDJ 10x sequence fastq dat
7 months ago by bk11 ★ 3.1k
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1.3k
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Answer: Answer: dittoHeatmap; adding column labels on the heatmap
7 months ago by bk11 ★ 3.1k
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900
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Comment: Comment: Bulk RNA seq PCA plot issues
7 months ago by bk11 ★ 3.1k
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1.5k
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Comment: Comment: Permutations FGSEA
7 months ago by bk11 ★ 3.1k
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1.4k
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Comment: Comment: Help with subset seurat object by a column in metadata
8 months ago by bk11 ★ 3.1k
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1
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1.1k
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Answer: Answer: Dealing with 2 different layers of counts within RNA assay in seurat
8 months ago by bk11 ★ 3.1k
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694
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Comment: Comment: Pedigree information
8 months ago by bk11 ★ 3.1k
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1
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553
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Answer: Answer: Merging bfiles
8 months ago by bk11 ★ 3.1k
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533
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Comment: Comment: Extracting column from one seurat object based on common column and adding to th
8 months ago by bk11 ★ 3.1k
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481
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Comment: Comment: Pre-imputation checks using 1000G data (hg19) for a hg38 VCF
8 months ago by bk11 ★ 3.1k
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587
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Answer: Answer: Best approach for identifying top proteins in a single cluster in single-cell an
8 months ago by bk11 ★ 3.1k
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707
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Answer: Answer: High inconsistency between edgeR and DESeq2
8 months ago by bk11 ★ 3.1k
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1
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943
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Answer: Answer: Best practice for gene ontology/pathway/geneset enrichment in 10x data
8 months ago by bk11 ★ 3.1k
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0
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1.2k
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Answer: Answer: Plink HWE QC question
8 months ago by bk11 ★ 3.1k
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1
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542
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Comment: Comment: How to merge two species of scATAC data
9 months ago by bk11 ★ 3.1k
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1
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745
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Comment: Comment: CCA integration
9 months ago by bk11 ★ 3.1k
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750
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Answer: Answer: Enhanced Volcano not working on ANY data. Coerces everything to NaN
9 months ago by bk11 ★ 3.1k
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726
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Comment: Comment: Using findmarker of seurat with different test.use but getting the same resulat.
9 months ago by bk11 ★ 3.1k
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777
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Answer: Answer: Updating phenotype column for .ped .fam files (PLINK --pheno not working)
9 months ago by bk11 ★ 3.1k
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0
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1.5k
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Answer: Answer: Remove part of a header in a fasta file
9 months ago by bk11 ★ 3.1k
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1.7k
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Comment: Comment: Seurat V5 Subscript Out of Bounds Error
9 months ago by bk11 ★ 3.1k
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1
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716
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Comment: Comment: R package to visualize multiple aligned chromatograms
9 months ago by bk11 ★ 3.1k
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1
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693
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Answer: Answer: Appending a Poly-A Tail to a Reference Transcriptome
10 months ago by bk11 ★ 3.1k
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1
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1.2k
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Answer: Answer: Plotting LD heat map with plink.ld result
10 months ago by bk11 ★ 3.1k
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1.1k
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Comment: Comment: Last against ncbi nr database
10 months ago by bk11 ★ 3.1k
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0
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446
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Comment: Comment: QC for UKB GWAS data
10 months ago by bk11 ★ 3.1k
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1
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1.1k
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Comment: Comment: Last against ncbi nr database
10 months ago by bk11 ★ 3.1k
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1
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676
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Comment: Comment: Where to find open access data of SNP arrays to perform GWAS
10 months ago by bk11 ★ 3.1k
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0
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917
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Comment: Comment: Unable to open HDF5 file
10 months ago by bk11 ★ 3.1k
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0
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681
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Comment: Comment: plink2 giving multiple errors
10 months ago by bk11 ★ 3.1k
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1
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681
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Comment: Comment: plink2 giving multiple errors
10 months ago by bk11 ★ 3.1k
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0
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418
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Comment: Comment: how to visualize Geno Ontology classification
10 months ago by bk11 ★ 3.1k
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1
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532
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Answer: Answer: Remove bacterial and protoza from Kraken2 EuPathDB
10 months ago by bk11 ★ 3.1k
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0
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1.8k
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Comment: Comment: Can't increase font size for x axis
11 months ago by bk11 ★ 3.1k
2
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1
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1.8k
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Answer: Answer: Can't increase font size for x axis
11 months ago by bk11 ★ 3.1k
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0
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3.8k
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Answer: Answer: Good Bioinformatics Jokes/Puns?
11 months ago by bk11 ★ 3.1k
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1
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1.8k
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Answer: Answer: Should I normalize and scale my data again after doing subset(seu, idents=" ") i
11 months ago by bk11 ★ 3.1k
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1
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1.3k
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Comment: Comment: Histogram of normalized counts for each cell type
11 months ago by bk11 ★ 3.1k
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0
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1.3k
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Comment: Comment: ROH and Manhattan plot
11 months ago by bk11 ★ 3.1k
2
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1
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1.3k
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Answer: Answer: Histogram of normalized counts for each cell type
updated 11 months ago by 45k • written 11 months ago by ★ 3.1k
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1
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1.3k
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Comment: Comment: ROH and Manhattan plot
11 months ago by bk11 ★ 3.1k
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1
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1.8k
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Comment: Comment: Subset cells in Seurat data based on reads and gene expression
updated 11 months ago by 45k • written 11 months ago by ★ 3.1k
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1
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1.8k
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Answer: Answer: Subset cells in Seurat data based on reads and gene expression
updated 11 months ago by 45k • written 12 months ago by ★ 3.1k
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1
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1.3k
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Answer: Answer: Am I getting TPM correct from tcga?
updated 12 months ago by 45k • written 12 months ago by ★ 3.1k
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1.3k
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Comment: Comment: METAL ERROR: The command you issued could not be processed ...
12 months ago by bk11 ★ 3.1k
2
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1
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1.0k
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Answer: Answer: Consistent cluster coloring
12 months ago by bk11 ★ 3.1k
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1
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1.7k
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Answer: Answer: Slot to pull data from for DoHeatmap
12 months ago by bk11 ★ 3.1k
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1
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751
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Comment: Comment: Phasing human samples with Shapeit4
12 months ago by bk11 ★ 3.1k
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0
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673
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Answer: Answer: MGI DNBelab C Series High-throughput Single-cell RNA Library Preparation Set V3.
12 months ago by bk11 ★ 3.1k
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