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79
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Comment: Comment: ScRNA data question
3 hours ago by bk11 ★ 2.3k
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0
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640
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Comment: Comment: How to convert plink files to Hapmap Format
1 day ago by bk11 ★ 2.3k
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1
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640
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Comment: Comment: How to convert plink files to Hapmap Format
1 day ago by bk11 ★ 2.3k
0
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1
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640
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Comment: Comment: How to convert plink files to Hapmap Format
1 day ago by bk11 ★ 2.3k
2
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0
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196
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Answer: Answer: Seurat merge and batch correction
updated 1 day ago by 43k • written 1 day ago by ★ 2.3k
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0
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143
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Comment: Comment: Find subcluster under a cluster, find differential genes in one cluster between
1 day ago by bk11 ★ 2.3k
0
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1
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640
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Comment: Comment: How to convert plink files to Hapmap Format
1 day ago by bk11 ★ 2.3k
0
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1
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640
views
Comment: Comment: How to convert plink files to Hapmap Format
2 days ago by bk11 ★ 2.3k
1
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1
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640
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Comment: Comment: How to convert plink files to Hapmap Format
2 days ago by bk11 ★ 2.3k
0
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0
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125
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Comment: Comment: Subset Seurat object from Xenium spatial data
2 days ago by bk11 ★ 2.3k
0
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2
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252
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Comment: Comment: Downsampling fastq file
updated 3 days ago by 43k • written 3 days ago by ★ 2.3k
0
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1
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420
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Comment: Comment: QC exclusion of A/T or G/C alleles to avoid strand issues
7 days ago by bk11 ★ 2.3k
0
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1
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533
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Comment: Comment: How to get the reference panel for UKBB
8 days ago by bk11 ★ 2.3k
2
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1
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243
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Answer: Answer: How to filter columns in a raw sparse matrix in R
8 days ago by bk11 ★ 2.3k
0
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0
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415
views
Comment: Comment: Rename multiple fastq.gz files
8 days ago by bk11 ★ 2.3k
0
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1
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415
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Comment: Comment: Rename multiple fastq.gz files
9 days ago by bk11 ★ 2.3k
1
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1
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415
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Answer: Answer: Rename multiple fastq.gz files
9 days ago by bk11 ★ 2.3k
0
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0
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192
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Comment: Comment: How to get the reference panel sites for TOPMed hg37 and 38
9 days ago by bk11 ★ 2.3k
0
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0
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184
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Answer: Answer: convert h5ad to rds
14 days ago by bk11 ★ 2.3k
0
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0
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579
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Comment: Comment: 99.9999% of Q30 bases is normal?
15 days ago by bk11 ★ 2.3k
2
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1
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292
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Comment: Comment: Addmetadata to seurat obj
15 days ago by bk11 ★ 2.3k
1
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1
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217
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Comment: Comment: convert a seurat object to expressionset
15 days ago by bk11 ★ 2.3k
0
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1
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560
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Comment: Comment: Removing adapter/primer sequence from reads while keeping flanking regions
23 days ago by bk11 ★ 2.3k
1
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0
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223
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Comment: Comment: Cell type classification using an integrated reference
24 days ago by bk11 ★ 2.3k
0
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0
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204
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Answer: Answer: RNA-seq with normalized cpm count
4 weeks ago by bk11 ★ 2.3k
0
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1
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455
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Answer: Answer: 'Invalid parameter' error to generate a count matrix using featurecounts
5 weeks ago by bk11 ★ 2.3k
1
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1
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280
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Answer: Answer: Seurat: CreateSeuratObject error, please help
6 weeks ago by bk11 ★ 2.3k
3
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0
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508
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Answer: Answer: SHAPEIT5 phasing
6 weeks ago by bk11 ★ 2.3k
1
vote
1
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378
views
Comment: Comment: How to find what is the most significantly modulated gene in GEO2R analysis?
9 weeks ago by bk11 ★ 2.3k
0
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1
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343
views
Answer: Answer: Converting SNP data table into .traw format or qtl (R) format
9 weeks ago by bk11 ★ 2.3k
1
vote
1
reply
765
views
Comment: Comment: ensembl - selecting SNPs of specific genes
9 weeks ago by bk11 ★ 2.3k
0
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1
reply
765
views
Comment: Comment: ensembl - selecting SNPs of specific genes
9 weeks ago by bk11 ★ 2.3k
1
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1
reply
765
views
Comment: Comment: ensembl - selecting SNPs of specific genes
10 weeks ago by bk11 ★ 2.3k
3
votes
1
reply
765
views
Answer: Answer: ensembl - selecting SNPs of specific genes
10 weeks ago by bk11 ★ 2.3k
1
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0
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244
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Answer: Answer: 1000 genome project specific genes selection
10 weeks ago by bk11 ★ 2.3k
0
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0
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473
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Answer: Answer: reading scRNAseq .h5 file into anndata format from GEO - No clear matrix?
10 weeks ago by bk11 ★ 2.3k
0
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0
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275
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Comment: Comment: X chromosome inactivation
10 weeks ago by bk11 ★ 2.3k
0
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0
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273
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Answer: Answer: GWAS on unbalanced case-control UKB dataset using PLINK2
10 weeks ago by bk11 ★ 2.3k
0
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0
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408
views
Comment: Comment: Need suggestions for ROC Curve in R
10 weeks ago by bk11 ★ 2.3k
0
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0
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248
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Comment: Comment: CellPlex CMO highbackground
10 weeks ago by bk11 ★ 2.3k
0
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1
reply
467
views
Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
10 weeks ago by bk11 ★ 2.3k
0
votes
1
reply
467
views
Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
10 weeks ago by bk11 ★ 2.3k
0
votes
1
reply
340
views
Comment: Comment: How to choose --hwe threshold?
11 weeks ago by bk11 ★ 2.3k
1
vote
0
replies
414
views
Comment: Comment: Merge seurat list
11 weeks ago by bk11 ★ 2.3k
0
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0
replies
368
views
Comment: Comment: GO enrichment plot with dotplot strange axis
11 weeks ago by bk11 ★ 2.3k
1
vote
1
reply
414
views
Answer: Answer: Merge seurat list
11 weeks ago by bk11 ★ 2.3k
0
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1
reply
368
views
Comment: Comment: GO enrichment plot with dotplot strange axis
11 weeks ago by bk11 ★ 2.3k
2
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1
reply
499
views
Answer: Answer: Splitting scRNA seq data from Multiome data(scRNA+ scATAC)
updated 10 weeks ago by 43k • written 11 weeks ago by ★ 2.3k
1
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1
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1.2k
views
Answer: Answer: Issues with Merging Seurat Objects: Multiple Counts in Assays Layer
11 weeks ago by bk11 ★ 2.3k
0
votes
1
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479
views
Comment: Comment: How to find SNP locations in assemblies other than hg38
11 weeks ago by bk11 ★ 2.3k
389 results • Page 1 of 8
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