Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
1
vote
0
replies
424
views
Comment: Comment: Transcript Based Annotation of Variants Using Annovar
3 months ago by bk11 ★ 2.3k
0
votes
1
reply
379
views
Comment: Comment: Freyja tool help
3 months ago by bk11 ★ 2.3k
1
vote
0
replies
304
views
Answer: Answer: filter 1000 genome vcf file to keep common snps
3 months ago by bk11 ★ 2.3k
0
votes
0
replies
611
views
Answer: Answer: Liftover - Picard and plink issues when performing liftover from CanFam4 to CanF
3 months ago by bk11 ★ 2.3k
1
vote
0
replies
227
views
Comment: Comment: Extract Domain Architectures from Pfam / Interpro
3 months ago by bk11 ★ 2.3k
0
votes
0
replies
274
views
Comment: Comment: Compute ld and genomic distance using clump function in plink
3 months ago by bk11 ★ 2.3k
1
vote
1
reply
953
views
Comment: Comment: How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objec
3 months ago by bk11 ★ 2.3k
1
vote
1
reply
953
views
Answer: Answer: How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objec
3 months ago by bk11 ★ 2.3k
0
votes
0
replies
469
views
Comment: Comment: sample data for plant RNA seq analysis
3 months ago by bk11 ★ 2.3k
1
vote
0
replies
360
views
Comment: Comment: RNA-Seq and ATAC-Seq quality check
3 months ago by bk11 ★ 2.3k
0
votes
0
replies
689
views
Comment: Comment: There are several lines in Manhattan plot.
3 months ago by bk11 ★ 2.3k
2
votes
0
replies
312
views
Answer: Answer: OSCA -open .h5 file
3 months ago by bk11 ★ 2.3k
0
votes
0
replies
491
views
Comment: Comment: Help with PRS score
4 months ago by bk11 ★ 2.3k
0
votes
1
reply
491
views
Comment: Comment: Help with PRS score
4 months ago by bk11 ★ 2.3k
0
votes
1
reply
491
views
Comment: Comment: Help with PRS score
4 months ago by bk11 ★ 2.3k
0
votes
0
replies
284
views
Comment: Comment: Trimming reads before running Juicer
4 months ago by bk11 ★ 2.3k
1
vote
0
replies
318
views
Comment: Comment: Metabolomics Data Analysis
4 months ago by bk11 ★ 2.3k
0
votes
1
reply
689
views
Answer: Answer: There are several lines in Manhattan plot.
4 months ago by bk11 ★ 2.3k
0
votes
1
reply
412
views
Answer: Answer: tool to find enhancer associated to gene list
4 months ago by bk11 ★ 2.3k
1
vote
1
reply
569
views
Answer: Answer: How to compute Hudson's/Bhatia's FST in R OR with vcf?
4 months ago by bk11 ★ 2.3k
0
votes
1
reply
423
views
Comment: Comment: Seeking Individual-Level Genotype Data for Linkage Disequilibrium Analysis Beyon
4 months ago by bk11 ★ 2.3k
1
vote
0
replies
584
views
Answer: Answer: Convert bed file from hg19 to GRCH38
4 months ago by bk11 ★ 2.3k
0
votes
0
replies
386
views
Comment: Comment: select unique samples in R
4 months ago by bk11 ★ 2.3k
0
votes
13
replies
1.5k
views
Generating count matrix from Chromium Fixed RNA Profiling (FRP) data outside Cell Ranger.
fixed-RNA-profiling chromium cellranger scFFPE
updated 4 months ago by ▴ 70 • written 6 months ago by ★ 2.3k
0
votes
0
replies
2.3k
views
Comment: Comment: Cellcyclescoring did not work in Seurat V5
4 months ago by bk11 ★ 2.3k
2
votes
2
replies
552
views
Answer: Answer: Alternatives to snpflip to find ambigious and flipped snps
5 months ago by bk11 ★ 2.3k
1
vote
1
reply
438
views
Comment: Comment: Quality control on imputed genotypes for GWAS / application of PGS
5 months ago by bk11 ★ 2.3k
2
votes
0
replies
1.5k
views
Answer: Answer: keep getting error while trying to convert Seurat object into a H5ad file
5 months ago by bk11 ★ 2.3k
0
votes
1
reply
939
views
Comment: Comment: scRNA-seq quality control
5 months ago by bk11 ★ 2.3k
1
vote
1
reply
868
views
Comment: Comment: duplicates issues when trying to convert long to wide in R
5 months ago by bk11 ★ 2.3k
0
votes
0
replies
497
views
Answer: Answer: Perform PCA
5 months ago by bk11 ★ 2.3k
1
vote
1
reply
868
views
Answer: Answer: duplicates issues when trying to convert long to wide in R
5 months ago by bk11 ★ 2.3k
1
vote
1
reply
460
views
Comment: Comment: A question about the missing or not observed alleles in PLINK datasets
5 months ago by bk11 ★ 2.3k
0
votes
0
replies
287
views
Comment: Comment: Should I apply doublet detection for each pool seperately?
5 months ago by bk11 ★ 2.3k
0
votes
0
replies
595
views
Comment: Comment: convert matrix files from 10X (single cell) to h5 file
5 months ago by bk11 ★ 2.3k
1
vote
0
replies
435
views
Answer: Answer: LD D-prime (D') calculation
5 months ago by bk11 ★ 2.3k
0
votes
0
replies
463
views
Answer: Answer: Plink Error
5 months ago by bk11 ★ 2.3k
0
votes
0
replies
456
views
Answer: Answer: XLOC gene id
5 months ago by bk11 ★ 2.3k
0
votes
0
replies
592
views
Answer: Answer: PLINK Error: No valid entries in --score file
5 months ago by bk11 ★ 2.3k
1
vote
0
replies
809
views
Comment: Comment: Read multiple vcf files into R
5 months ago by bk11 ★ 2.3k
1
vote
0
replies
552
views
Answer: Answer: how to merge multiple files based on column header
updated 5 months ago by 43k • written 5 months ago by ★ 2.3k
0
votes
1
reply
456
views
Comment: Comment: Normalized data values very different from unnormalized counts in Seurat
5 months ago by bk11 ★ 2.3k
1
vote
1
reply
885
views
Comment: Comment: A question about genotyping rate
5 months ago by bk11 ★ 2.3k
0
votes
1
reply
885
views
Comment: Comment: A question about genotyping rate
5 months ago by bk11 ★ 2.3k
0
votes
1
reply
885
views
Comment: Comment: A question about genotyping rate
5 months ago by bk11 ★ 2.3k
3
votes
1
reply
728
views
Answer: Answer: Integration Seurat different healthy samples (fresh vs frozen)
5 months ago by bk11 ★ 2.3k
0
votes
1
reply
772
views
Answer: Answer: Doheatmap in seurat
5 months ago by bk11 ★ 2.3k
3
votes
0
replies
372
views
Answer: Answer: How to retrieve the number of reads mapped for each chromosome in the BAM file o
5 months ago by bk11 ★ 2.3k
0
votes
1
reply
699
views
Comment: Comment: Bowtie2/Fastq-dump problem
5 months ago by bk11 ★ 2.3k
0
votes
0
replies
568
views
Comment: Comment: will using samtools merge to multiple bam files also remove the redundancy ?
5 months ago by bk11 ★ 2.3k
378 results • Page 2 of 8
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6