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1
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1.9k
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Answer: C: Why bioMart query results in a low coverage of annotations
5.2 years ago by Kevin Blighe 90k
1
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1
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2.6k
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Answer: A: Could I use the ExpressionSet generated from GEOquery for Monocle3 or does it ha
5.2 years ago by Kevin Blighe 90k
29
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4
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58k
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Answer: Answer: Batch effects : ComBat or removebatcheffects (limma package) ?
4.5 years ago by Kevin Blighe 90k
2
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1
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16k
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Comment: C: Extracting features or gene from PCA after calculating PCA for downstream analys
5.2 years ago by Kevin Blighe 90k
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3.0k
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Answer: Answer: Cleaning the expression matrix for the purpose of deconvolution of RNA-Seq data
2.7 years ago by Kevin Blighe 90k
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0
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3.4k
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Comment: C: When is it valid to use differentially expressed genes as input in WGCNA?
5.2 years ago by Kevin Blighe 90k
3
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3.4k
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Answer: A: When is it valid to use differentially expressed genes as input in WGCNA?
5.2 years ago by Kevin Blighe 90k
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5.8k
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Comment: C: Getting TMM from DESeq2
5.2 years ago by Kevin Blighe 90k
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5.8k
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Comment: C: Getting TMM from DESeq2
5.2 years ago by Kevin Blighe 90k
79
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2
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92k
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Answer: A: How do I explain the difference between edgeR, LIMMA, DESeq etc. to experimental
5.2 years ago by Kevin Blighe 90k
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1
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5.8k
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Comment: C: Getting TMM from DESeq2
5.2 years ago by Kevin Blighe 90k
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1
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5.2k
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Comment: C: Converting HGNC to ensembl and entrez id's using biomart
5.2 years ago by Kevin Blighe 90k
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2.3k
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Comment: C: Extract base information from aligned reads in a sam file
5.2 years ago by Kevin Blighe 90k
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1
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2.7k
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Comment: C: differentially expressed genes among multiple groups
5.2 years ago by Kevin Blighe 90k
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0
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1.1k
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Comment: C: pcaExplorer greyed out should I wait or Is there a problem I have to fix
5.2 years ago by Kevin Blighe 90k
2
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1
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5.2k
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Answer: A: Converting HGNC to ensembl and entrez id's using biomart
5.2 years ago by Kevin Blighe 90k
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0
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5.8k
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Comment: C: Getting TMM from DESeq2
5.2 years ago by Kevin Blighe 90k
2
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2
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5.8k
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Answer: A: Getting TMM from DESeq2
5.2 years ago by Kevin Blighe 90k
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0
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1.1k
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Comment: C: I am trying to get the metadata to run a PCA analysis using the package pcaExplo
5.2 years ago by Kevin Blighe 90k
2
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1
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7.5k
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Answer: A: DESeq2 vst function error
5.2 years ago by Kevin Blighe 90k
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0
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13k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.2 years ago by Kevin Blighe 90k
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2
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13k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.2 years ago by Kevin Blighe 90k
22
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3
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10k
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Answer: A: Resources for gene signature creation
5.2 years ago by Kevin Blighe 90k
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1.7k
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Comment: C: RNA Seq and Somatic Calls for the Cancer data
5.2 years ago by Kevin Blighe 90k
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1.2k
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Comment: C: Regression Analysis between RNA-seq data and expression measured from ELISA
5.2 years ago by Kevin Blighe 90k
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1
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1.7k
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Answer: A: RNA Seq and Somatic Calls for the Cancer data
5.2 years ago by Kevin Blighe 90k
2
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1
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13k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.2 years ago by Kevin Blighe 90k
1
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0
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1.6k
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Comment: C: rare SNP or SNV
5.2 years ago by Kevin Blighe 90k
0
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1
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2.8k
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Comment: C: WCGNA to Cytoscape
5.2 years ago by Kevin Blighe 90k
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0
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1.7k
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Comment: C: Exome variants limited only to the first half of a gene? Technical error?
5.2 years ago by Kevin Blighe 90k
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0
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963
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Comment: C: what is vcf fie ? it is mean?
5.2 years ago by Kevin Blighe 90k
2
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1.2k
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Answer: A: correlation between expression and tumor size
5.2 years ago by Kevin Blighe 90k
2
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0
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5.2k
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Answer: A: file and directory management best practices
5.2 years ago by Kevin Blighe 90k
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0
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5.2k
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Comment: C: file and directory management best practices
5.2 years ago by Kevin Blighe 90k
0
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1
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1.7k
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Comment: C: Microarray analysis of illumina microchips
5.2 years ago by Kevin Blighe 90k
6
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1
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8.6k
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Answer: A: ESTIMATE (Estimation of STromal and Immune cells in MAlignant Tumor tissues usin
5.2 years ago by Kevin Blighe 90k
1
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0
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4.8k
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Answer: A: Kallisto missing Bootstrap
5.2 years ago by Kevin Blighe 90k
0
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1
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1.7k
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Answer: A: Microarray analysis of illumina microchips
5.2 years ago by Kevin Blighe 90k
2
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1
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3.0k
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Answer: C: illumina HumanHT-12 v4.0 expression beadchip
5.2 years ago by Kevin Blighe 90k
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0
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1.0k
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Comment: C: Problem with Slider for Cytoscape Filter
5.2 years ago by Kevin Blighe 90k
0
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2
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8.6k
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Comment: C: ESTIMATE (Estimation of STromal and Immune cells in MAlignant Tumor tissues usin
5.2 years ago by Kevin Blighe 90k
1
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1
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3.0k
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Answer: C: Statistical test on Single-cell clusters(cell types)
5.2 years ago by Kevin Blighe 90k
0
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0
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3.0k
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Comment: C: Statistical test on Single-cell clusters(cell types)
5.2 years ago by Kevin Blighe 90k
1
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2
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3.0k
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Comment: C: Statistical test on Single-cell clusters(cell types)
5.2 years ago by Kevin Blighe 90k
1
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1
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10k
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Comment: C: Time-course RNA-seq analysis in Deseq2
5.3 years ago by Kevin Blighe 90k
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0
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3.0k
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Answer: A: Which tools do you miss?
5.3 years ago by Kevin Blighe 90k
1
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1
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5.2k
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Comment: C: Convert gene ID to gene name/symbol in gene set file (GMT)
5.3 years ago by Kevin Blighe 90k
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1
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2.1k
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Comment: C: List of uniquely expressed genes
5.3 years ago by Kevin Blighe 90k
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0
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2.1k
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Comment: C: Genotype PCA from genotype matrix
5.3 years ago by Kevin Blighe 90k
0
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1
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820
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Comment: C: Co-relation analysis between three variance
5.3 years ago by Kevin Blighe 90k
9,978 results • Page 36 of 200
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