Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
0
votes
0
replies
210
views
Comment: Comment: How to identify gaps in a genome?
1 day ago by rj.rezwan • 0
0
votes
2
replies
210
views
How to identify gaps in a genome?
awk seqkit assembly fasta genome
1 day ago by rj.rezwan • 0
3
votes
1
reply
251
views
how to change the gene header names in a fasta file?
fasta bioawk awk seqkit
updated 4 days ago by 43k • written 4 days ago by • 0
0
votes
0
replies
257
views
Comment: Comment: kmer analysis for genome size estimation
12 days ago by rj.rezwan • 0
0
votes
0
replies
257
views
Comment: Comment: kmer analysis for genome size estimation
12 days ago by rj.rezwan • 0
0
votes
4
replies
257
views
kmer analysis for genome size estimation
kmer merqury allotetraploid pacbio hifiasm
12 days ago by rj.rezwan • 0
0
votes
0
replies
406
views
Comment: Comment: why the file is low after combining the Hi-C reads using Arima genomics pipeline
5 weeks ago by rj.rezwan • 0
0
votes
1
reply
406
views
Comment: Comment: why the file is low after combining the Hi-C reads using Arima genomics pipeline
5 weeks ago by rj.rezwan • 0
0
votes
1
reply
406
views
Comment: Comment: why the file is low after combining the Hi-C reads using Arima genomics pipeline
5 weeks ago by rj.rezwan • 0
0
votes
6
replies
406
views
why the file is low after combining the Hi-C reads using Arima genomics pipeline of mapping
bwa mapping genome samtools plants
5 weeks ago by rj.rezwan • 0
0
votes
0
replies
120
views
issue with the Arima genomics pipeline for Hi-C scaffolding
plant pacbio assembly genome Hi-C
6 weeks ago by rj.rezwan • 0
1
vote
1
reply
218
views
Is there any database for transposable elements in cactus plants
EDTA transposable-elements
updated 7 weeks ago by 43k • written 7 weeks ago by • 0
0
votes
0
replies
465
views
Comment: Comment: allele matching between identical genotypes
9 weeks ago by rj.rezwan • 0
0
votes
4
replies
465
views
allele matching between identical genotypes
haplotyping plink vcf GATK varaint
9 weeks ago by rj.rezwan • 0
0
votes
0
replies
465
views
Comment: Comment: allele matching between identical genotypes
10 weeks ago by rj.rezwan • 0
0
votes
1
reply
354
views
how to run the compare_genomes for comparative analysis
genome orthofinder evolution
updated 4 months ago by ★ 1.9k • written 4 months ago by • 0
0
votes
2
replies
811
views
Comment: Comment: How to download multiple genome files using command line (MacOS) using datasets
4 months ago by rj.rezwan • 0
0
votes
0
replies
957
views
Comment: Comment: file conversion from gtf to gff3 for evidence modeler
6 months ago by rj.rezwan • 0
0
votes
1
reply
957
views
Comment: Comment: file conversion from gtf to gff3 for evidence modeler
6 months ago by rj.rezwan • 0
0
votes
1
reply
957
views
Comment: Comment: file conversion from gtf to gff3 for evidence modeler
updated 6 months ago by 43k • written 6 months ago by • 0
0
votes
1
reply
957
views
Comment: Comment: file conversion from gtf to gff3 for evidence modeler
6 months ago by rj.rezwan • 0
0
votes
1
reply
957
views
Comment: Comment: file conversion from gtf to gff3 for evidence modeler
6 months ago by rj.rezwan • 0
1
vote
10
replies
957
views
file conversion from gtf to gff3 for evidence modeler
gff3 stringtie gtf
6 months ago by rj.rezwan • 0
0
votes
1
reply
687
views
Comment: Comment: samtools produces truncated error during merging the bam files
6 months ago by rj.rezwan • 0
2
votes
3
replies
687
views
samtools produces truncated error during merging the bam files
bam samtools HISAT
updated 6 months ago by 43k • written 6 months ago by • 0
2
votes
5
replies
938
views
6 follow
Forum: Biostar as a next generation version
meta mobile-app
updated 6 months ago by 43k • written 7 months ago by • 0
0
votes
1
reply
812
views
Comment: Comment: investigate the inversions in comparison of assembled genome with reference geno
8 months ago by rj.rezwan • 0
0
votes
3
replies
812
views
investigate the inversions in comparison of assembled genome with reference genome
genome assembly scaffold ragtag dotplot
updated 8 months ago by ▴ 510 • written 8 months ago by • 0
0
votes
1
reply
870
views
Comment: Comment: How to find the coverage of the assembled contigs of the PacBio long reads?
8 months ago by rj.rezwan • 0
2
votes
3
replies
870
views
How to find the coverage of the assembled contigs of the PacBio long reads?
PacBio assembly coverage
updated 8 months ago by ★ 1.4k • written 8 months ago by • 0
0
votes
0
replies
673
views
Comment: Comment: How to make the SNP density plot using hapmap file
9 months ago by rj.rezwan • 0
1
vote
2
replies
673
views
How to make the SNP density plot using hapmap file
vcf haplotype hapmap CMplot
9 months ago by rj.rezwan • 0
0
votes
0
replies
322
views
How to perform a phylogenetic analysis from a vcf file
variants haplotyping phylogeny vcf
10 months ago by rj.rezwan • 0
4
votes
2
replies
873
views
How to calculate kinship matrix table from vcf file
variants haplotyping kinship heatmap
updated 10 months ago by 10k • written 10 months ago by • 0
0
votes
0
replies
286
views
how to retrieve the chunk of every chromosome from a vcf file
haplotyping varaints
11 months ago by rj.rezwan • 0
0
votes
0
replies
631
views
Comment: Comment: how to make a header name in a haplotyping script of gatk?
12 months ago by rj.rezwan • 0
0
votes
0
replies
631
views
Comment: Comment: how to make a header name in a haplotyping script of gatk?
12 months ago by rj.rezwan • 0
2
votes
6
replies
631
views
how to make a header name in a haplotyping script of gatk?
headername gatk haplotypecalling
12 months ago by rj.rezwan • 0
0
votes
1
reply
631
views
Comment: Comment: how to make a header name in a haplotyping script of gatk?
12 months ago by rj.rezwan • 0
0
votes
1
reply
971
views
Comment: Comment: why CombineGCVFs in gatk not showing all the samples name?
updated 12 months ago by 43k • written 12 months ago by • 0
0
votes
1
reply
971
views
Comment: Comment: why CombineGCVFs in gatk not showing all the samples name?
12 months ago by rj.rezwan • 0
0
votes
1
reply
971
views
Comment: Comment: why CombineGCVFs in gatk not showing all the samples name?
12 months ago by rj.rezwan • 0
2
votes
7
replies
971
views
why CombineGCVFs in gatk not showing all the samples name?
haplotypecalling CombineGVCFs GATK
updated 12 months ago by 43k • written 12 months ago by • 0
0
votes
1
reply
965
views
Comment: Comment: error with CombineGVCFs to join large number of files
12 months ago by rj.rezwan • 0
6
votes
5
replies
965
views
error with CombineGVCFs to join large number of files
haplotypecalling CombineGVCFs GATK
12 months ago by rj.rezwan • 0
1
vote
1
reply
406
views
Why GATK is slow with haplotypecalling
GATK HaplotypeCalling
updated 13 months ago by 161k • written 13 months ago by • 0
0
votes
0
replies
1.3k
views
Comment: Comment: GATK error of Argument --emit-ref-confidence
13 months ago by rj.rezwan • 0
0
votes
1
reply
1.3k
views
Comment: Comment: GATK error of Argument --emit-ref-confidence
13 months ago by rj.rezwan • 0
0
votes
4
replies
1.3k
views
GATK error of Argument --emit-ref-confidence
argument GATK HaplotypeCaller
13 months ago by rj.rezwan • 0
0
votes
1
reply
1.5k
views
Comment: Comment: GATK showing error of reference file index
updated 13 months ago by 43k • written 13 months ago by • 0
83 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6