User: rahmati.razieh83

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Posts by rahmati.razieh83

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Comment: C: trimming PE RNA Reads
... Thank for your comment ...
written 8 days ago by rahmati.razieh830
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Comment: C: trimming PE RNA Reads
... ![this is the adapter content graph in fastqc][1] [1]: http://s8.picofile.com/file/8311517768/adapter_graph_problem_1_.png ...
written 9 days ago by rahmati.razieh830
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Comment: A: trimming PE RNA Reads
... I think I must explain my problem more. maybe it is not as enough as clear. I have received some RNA reads prepared by SENSE mRNA-Seq Library Prep kit V2. After quality test of RNA seq reads with fastqc software, I found out that some reads showed red and some others yellow adapter content. What i ...
written 10 days ago by rahmati.razieh830
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(Closed) adapter trimming PE RNA reads
... Dear all I have received some RNA reads prepared by SENSE mRNA-Seq Library Prep kit V2. After quality test of RNA seq reads with fastqc software, I found out that some reads showed red and some others yellow adapter content. What is common between the reads containing red and yellow adapter content ...
rna-seq written 10 days ago by rahmati.razieh830
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trimming PE RNA Reads
... dear all; I have problem in the trimming my RNA seq reads. The problem is that although the length of all reads are the same, 101 nucleotids, quality test by fastqc shows some reads contain adapter (adapter content is red). For reads containing adapters, I trimmed them by Trimmomatic using ILLUM ...
rna-seq written 12 days ago by rahmati.razieh830
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definition of N50 in trinity
... I am going to start analyzing the RNA seq data by Trinity, but I do not know what is N50? we must determine N50 for trinity or trinity give it to us? ...
rna-seq written 5 weeks ago by rahmati.razieh830 • updated 5 weeks ago by Sej Modha2.2k

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