Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
all
0
votes
0
replies
294
views
Finding a list of heritable traits using GCTA
complex
heritability
traits
GCTA
21 months ago by
samuelandjw
▴ 250
2
votes
1
reply
509
views
Should we include genotype as covariates when performing EWAS?
methylation
EWAS
DNA
updated 15 months ago by
Ram
43k • written 22 months ago by
samuelandjw
▴ 250
2
votes
1
reply
464
views
What are the general strategies in assessing new differentially methylation positions obtained from EWAS?
methylation
EWAS
DNA
updated 15 months ago by
Ram
43k • written 22 months ago by
samuelandjw
▴ 250
4
votes
1
reply
427
views
Is it okay to map reads from WES designed for GRCh37 to GRCh38?
exome
whole
sequencing
updated 22 months ago by
Pierre Lindenbaum
160k • written 22 months ago by
samuelandjw
▴ 250
0
votes
0
replies
383
views
How to get list of blood-expressed Fantom 5 enhancers?
fantom5
updated 22 months ago by
Ram
43k • written 22 months ago by
samuelandjw
▴ 250
0
votes
1
reply
711
views
Comment:
Comment: How to access the NCBI Molecular QTL Browser?
23 months ago by
samuelandjw
▴ 250
1
vote
3
replies
711
views
How to access the NCBI Molecular QTL Browser?
QTL
updated 23 months ago by
GenoMax
140k • written 23 months ago by
samuelandjw
▴ 250
0
votes
0
replies
7.7k
views
Comment:
Comment: Any FastQC alternative
23 months ago by
samuelandjw
▴ 250
0
votes
0
replies
274
views
How to group EWAS traits like GWAS catalog does?
GWAS
EWAS
23 months ago by
samuelandjw
▴ 250
3
votes
1
reply
585
views
reference request: list of DNA methylation sites with consistent methylation levels across individuals in blood
methylation
DNA
updated 2.1 years ago by
Papyrus
★ 2.9k • written 2.1 years ago by
samuelandjw
▴ 250
0
votes
0
replies
943
views
Answer:
Answer: Unable to install dplyr on Fedora 35
2.1 years ago by
samuelandjw
▴ 250
1
vote
1
reply
516
views
EWAS: should DNA methylation level be the independent variable or dependent variable?
DNA
EWAS
methylation
updated 19 months ago by
Peter
• 0 • written 2.2 years ago by
samuelandjw
▴ 250
0
votes
0
replies
1.4k
views
Comment:
Comment: Best practice for running GATK VQSR on X chromosome
2.4 years ago by
samuelandjw
▴ 250
1
vote
1
reply
565
views
Should we trust genotypes called in simple tandem repeat regions?
sequencing
GATK
WGS
WES
updated 2.4 years ago by
Istvan Albert
100k • written 2.4 years ago by
samuelandjw
▴ 250
0
votes
0
replies
656
views
Comment:
Comment: What is the largest freely available dataset of WGS samples?
2.4 years ago by
samuelandjw
▴ 250
3
votes
0
replies
506
views
GATK site filtering: when should I use VQSR or hard filtering?
VQSR
GATK
2.4 years ago by
samuelandjw
▴ 250
1
vote
0
replies
1.5k
views
Answer:
Answer: How to subset vcf by sample and write?
2.6 years ago by
samuelandjw
▴ 250
1
vote
0
replies
668
views
Comment:
Comment: GATK VQSR for human WGS
2.6 years ago by
samuelandjw
▴ 250
0
votes
0
replies
2.2k
views
Comment:
Comment: Error in plot-vcfstats
2.6 years ago by
samuelandjw
▴ 250
2
votes
0
replies
1.4k
views
Comment:
Comment: Using vcftools and got Error: Unknown option: --max-missing
2.6 years ago by
samuelandjw
▴ 250
0
votes
1
reply
5.8k
views
Comment:
Comment: plot-vcfstats
2.6 years ago by
samuelandjw
▴ 250
2
votes
1
reply
5.8k
views
Answer:
Answer: plot-vcfstats
2.6 years ago by
samuelandjw
▴ 250
0
votes
0
replies
1.4k
views
Comment:
Comment: Best practice for running GATK VQSR on X chromosome
2.7 years ago by
samuelandjw
▴ 250
0
votes
4
replies
1.4k
views
Best practice for running GATK VQSR on X chromosome
WGS
GATK
WES
2.4 years ago by
samuelandjw
▴ 250
0
votes
1
reply
2.4k
views
Comment:
Comment: Why is WGS/WES depth of Y chromosome highly variable?
2.7 years ago by
samuelandjw
▴ 250
1
vote
0
replies
2.4k
views
Comment:
Comment: Why is WGS/WES depth of Y chromosome highly variable?
2.7 years ago by
samuelandjw
▴ 250
11
votes
13
replies
2.4k
views
Why is WGS/WES depth of Y chromosome highly variable?
chromosome-Y
whole-genome-sequencing
updated 15 months ago by
Ram
43k • written 2.7 years ago by
samuelandjw
▴ 250
0
votes
1
reply
2.4k
views
Comment:
Comment: Why is WGS/WES depth of Y chromosome highly variable?
2.7 years ago by
samuelandjw
▴ 250
0
votes
0
replies
6.3k
views
Comment:
Comment: GATK genomicsDBimport intervals for WGS
2.7 years ago by
samuelandjw
▴ 250
1
vote
0
replies
2.7k
views
Comment:
Comment: Why is VCFtools excluding invariable sites?
2.9 years ago by
samuelandjw
▴ 250
0
votes
0
replies
5.9k
views
Comment:
Comment: plotting PCA PLINK eigenvec output in R
2.9 years ago by
samuelandjw
▴ 250
2
votes
1
reply
5.9k
views
Answer:
Answer: plotting PCA PLINK eigenvec output in R
2.9 years ago by
samuelandjw
▴ 250
0
votes
0
replies
628
views
Convert spanning deletions called by GATK back to regular indels
GATK
sequencing
3.4 years ago by
samuelandjw
▴ 250
0
votes
0
replies
2.0k
views
Answer:
A: How do I plot RFMix results?
3.5 years ago by
samuelandjw
▴ 250
0
votes
0
replies
8.7k
views
Comment:
C: bwa mem hard clipping
4.3 years ago by
samuelandjw
▴ 250
0
votes
0
replies
23k
views
Comment:
C: Bwa Mem Method For Mapping, With Or Without Trimming Reads?
4.3 years ago by
samuelandjw
▴ 250
0
votes
0
replies
1.7k
views
Comment:
C: meaning of Q_bias ADMIXTURE bootstrap
4.6 years ago by
samuelandjw
▴ 250
1
vote
2
replies
1.7k
views
meaning of Q_bias ADMIXTURE bootstrap
admixture
population
ancestry
updated 4.6 years ago by
icrojasb
• 0 • written 5.1 years ago by
samuelandjw
▴ 250
0
votes
1
reply
998
views
refine population phased haplotypes by pedigree
phasing
genotype
pedigree
population
updated 4.7 years ago by
bmstudent
• 0 • written 5.1 years ago by
samuelandjw
▴ 250
4
votes
0
replies
1.8k
views
Answer:
A: ADMIXTURE haploid mode does not converge
5.1 years ago by
samuelandjw
▴ 250
4
votes
1
reply
1.8k
views
ADMIXTURE haploid mode does not converge
admixture
population
updated 15 months ago by
Ram
43k • written 5.1 years ago by
samuelandjw
▴ 250
41 results • Page
1 of 1
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6