User: onemore100iq

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onemore100iq20
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Posts by onemore100iq

<prev • 30 results • page 1 of 3 • next >
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Comment: C: How to write Python script locally?
... Thank you so much. This is what I am going to do next time. ...
written 10 weeks ago by onemore100iq20
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Comment: C: How to write Python script locally?
... Python is a key element to Bioinformatics and i am just learning the basics of python to get into bioinformatics. so asking about the basics of something that is basically related to bioinformatics is ok. I just was in hurry and did not mention the bioinformatics details and I am solving a bioinform ...
written 11 weeks ago by onemore100iq20
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(Closed) How to write Python script locally?
... Hi, I am brand new to python and trying to learn it step by step and i would like to know how to write a local python script? what the meaning of writing a script locally? and how to use scp command to transfer it into your server? Thanks ...
python written 11 weeks ago by onemore100iq20
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DESeq2, function not found
... when I use this line ddsHTSeq <- DESeqDataSetFromHTSeqCount(sampleTable = sampleTable, directory = directory, design= ~ subtype) I got this error: could not find function DESeqDataSetFromHTSeqCount please help ...
rna-seq written 13 months ago by onemore100iq20 • updated 13 months ago by WouterDeCoster36k
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Comment: C: RNA-seq, R, DESeq2,
... Thanks. just one more question, How to do hierarchical clustering to cluster the transformed RNA-seq counts for a get gene set (x) and how to use sigclust2 on this transformed count matrix? Thank you so much in advance for helping a beginner, highly appreciated ...
written 13 months ago by onemore100iq20
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Comment: C: RNA-seq, R, DESeq2,
... Thank you so much, sir. I am just new to this field and sometimes getting confused between functions and arguments, and what should come next after this step, etc.... Anyway, thanks and highly appreciated your quick help. Thanks ...
written 13 months ago by onemore100iq20
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Comment: C: RNA-seq, R, DESeq2,
... Please, I need help with these 2 questions, I been trying for hours: after getting this matrixRLD, how to subset it so it includes a gene set that in table x in directory y? and if this table x has Enseml gene IDs and HGNC gene name how to get only HGNC gene names to be included in this new matrix? ...
written 13 months ago by onemore100iq20
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Comment: C: RNA-seq, R, DESeq2,
... Another 2 questions please, after getting this matrixRLD, how to subset it so it includes a gene set that in table x in directory y? and if this table x has Enseml gene IDs and HGNC gene name how to get only HGNC gene names to be included in this new matrix? Thanks in advance ...
written 13 months ago by onemore100iq20
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Comment: C: RNA-seq, R, DESeq2,
... Thank you so much, sir it worked perfectly ...
written 13 months ago by onemore100iq20
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RNA-seq, R, DESeq2,
... How to extract transformed counts from DESeqDataSet object as a matrix using assay? ...
rna-seq written 13 months ago by onemore100iq20 • updated 13 months ago by swbarnes24.7k

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Popular Question 5 months ago, created a question with more than 1,000 views. For unable to resolve host address 'ftp.ncbi.nlm.nih.gov'

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