User: azotov

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azotov0
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Posts by azotov

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Comment: C: Load data from NCBI .gpff files into a SQL database. Looking for a quicker way.
... Works like a charm! Thanks Pierre ...
written 3 months ago by azotov0
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Load data from NCBI .gpff files into a SQL database. Looking for a quicker way.
... I'm trying to load NCBI reference sequence data (from fftp://ftp.ncbi.nlm.nih.gov/refseq/release/complete/complete.nonredundant_protein.1.protein.gpff.gz) into an SQL server for further processing. I'm using a straightforward method with BioPython of parsing the text file with seqIO.parse() and then ...
biopython sql bioseqdatabase written 3 months ago by azotov0

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