User: vrrani

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vrrani10
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Posts by vrrani

<prev • 15 results • page 1 of 2 • next >
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Comment: C: Regression Coefficients Matrix
... Dear Dr. Kevin, Thanks for the suggestions, it is really helpful for our research. Regards, Reddy Rani V. ...
written 4 months ago by vrrani10
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Comment: C: Regression Coefficients Matrix
... Dear Dr. Kevin, I am interested to create a network and study the associations of the genes. So, can I still consider gene-gene associations of mRNA features as multi-omics in this case as I started it with regression coefficients? Thanks a bunch. Regards, Reddy Rani V. ...
written 4 months ago by vrrani10
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Comment: C: Regression Coefficients Matrix
... Dear Kevin, Thanks for the reply. Yes, I am interested in beta coefficients. But, for example, if I would like to study similar behavior of mRNA genes alone. Can I compute Euclidean measurement of the beta matrix to get an N x N matrix from my M x N beta matrix? Regards, Reddy rani V. ...
written 4 months ago by vrrani10
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Regression Coefficients Matrix
... I have computed regression coefficients between mRNA expression values (Y) and methylation features (X). So, I have a rectangular matrix with regression coefficients signifying the influence of Y features on X. My query is, can I perform Euclidean measurement on the regression coefficients/beta ma ...
gene written 4 months ago by vrrani10
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Comment: C: TCGA DATA mRNA and Methylation Genes
... Hi, Thanks for your reply. Why is that inverse relationship? What biological phenomena will allow us to notice this? Can I get any reference for this? Regards, Reddy Rani V. ...
written 10 months ago by vrrani10
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Comment: C: TCGA DATA mRNA and Methylation Genes
... The TCGA methylation and mRNA genes of a Breast cancer. When I checked with gene symbols I noticed common genes. For example : ABL1 AKT1 APC AXIN1 CASP8 CDH11 CDK6 CREB1 CTNNB1 DDB2 My question is, Is it a correct study to collect common genes of methylation and mRNA. What is the biological signif ...
written 10 months ago by vrrani10
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TCGA DATA mRNA and Methylation Genes
... I would like to know the biological significance of common genes of both mRNA and methylation. For example, of breast cancer data, out of gene-gene network created using methylation features, one can select top '100' genes, similarly, from mRNA gene-gene network if we had selected top '100' genes. ...
gene written 10 months ago by vrrani10
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Comment: C: arXiv Files of Bioinformatics domain
... Thanks for the help. How about citation? Can we directly cite a document in arXiv (or) we have to get the author concent ...
written 11 months ago by vrrani10
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arXiv Files of Bioinformatics domain
... Hi, I had done, gene-gene network study and willing to upload it at "arXiv". My questions are: 1. What is the section and subsection, in **https://arxiv.org/** -- to upload a document related to Bioinformatics? 2. In the Bioinformatics domain, do a document in '*arXiv*' will get cited? 3. If ...
gene forum written 11 months ago by vrrani10 • updated 11 months ago by genomax71k
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Comment: C: TCGA Dataset of cancer study
... Thank you. In the one of the article I am reading (Integration of Gene Expression Data and Methylation Reveals Genetic Networks for Glioblastoma), they had alternatively used the term 'transcriptome data' for 'gene expression data' and 'Epigenome data' for 'Methylation data'. I am new to biology ...
written 15 months ago by vrrani10

Latest awards to vrrani

Popular Question 9 months ago, created a question with more than 1,000 views. For RNA-SEQ Gene Enrichment Analysis Using DAVID
Popular Question 15 months ago, created a question with more than 1,000 views. For RNA Seq data for WGCNA

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