User: Daniel Hand

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Posts by Daniel Hand

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Kraken run time on galaxy clusters
... I have been running 0.2-2M 300 bp kraken jobs on the bacterial database on a private cloudman cluster with one c3.large master node (set to not do jobs) and 0-10 r3.8xlarge worker nodes (32 cores, 244 gb memory). The problem is that the jobs are taken between 6-13+ hours with the bacterial database ...
kraken galaxy cloudman written 2.1 years ago by Daniel Hand0

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